RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 IGFL2Q6UWQ7 119 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 NFAM1Q8NET5 270 aaPredicted RBP24.1■■□□□ 1.45
TRIM28-204ENST00000594806 OR14A16Q8NHC5 309 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 BRIX1Q8TDN6 353 aaKnown RBP24.1■■□□□ 1.45
TRIM28-204ENST00000594806 ARL8AQ96BM9 186 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 TM4SF18Q96CE8 201 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 PAIP2Q9BPZ3 127 aaKnown RBP24.1■■□□□ 1.45
TRIM28-204ENST00000594806 PCDHA9Q9Y5H5 950 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 CLCA3PQ9Y6N3 262 aa24.1■■□□□ 1.45
TRIM28-204ENST00000594806 K7EM74 188 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 FGF17O60258 216 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 MYO1DO94832 1006 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 PDGFAP04085 211 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 ITGAMP11215 1152 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 WDR4P57081 412 aaKnown RBP24.09■■□□□ 1.45
TRIM28-204ENST00000594806 TAS2R50P59544 299 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 FOLH1Q04609 750 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 KLRB1Q12918 225 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 H3F3CQ6NXT2 135 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 TRIM42Q8IWZ5 723 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 B3GNT7Q8NFL0 401 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 DNAJB14Q8TBM8 379 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 ELP5Q8TE02 316 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 RBM18Q96H35 190 aaKnown RBP24.09■■□□□ 1.45
TRIM28-204ENST00000594806 ACBD3Q9H3P7 528 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 EPS8L2Q9H6S3 715 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 KCNK13Q9HB14 408 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 TEX10Q9NXF1 929 aaPredicted RBP24.09■■□□□ 1.45
TRIM28-204ENST00000594806 PSME2Q9UL46 239 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 FIS1Q9Y3D6 152 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 CCL27Q9Y4X3 112 aa24.09■■□□□ 1.45
TRIM28-204ENST00000594806 GNG14A0A1W2PPG7 69 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 A8MUA0 341 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 HMGB1P1B2RPK0 211 aaPredicted RBP24.08■■□□□ 1.45
TRIM28-204ENST00000594806 CDK2AP1O14519 115 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 DYRK3O43781 588 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 ARRB2P32121 409 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 GALNSP34059 522 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 SOX11P35716 441 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 STT3AP46977 705 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 RAE1P78406 368 aaKnown RBP24.08■■□□□ 1.45
TRIM28-204ENST00000594806 PLIN5Q00G26 463 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 BTKQ06187 659 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 NFATC3Q12968 1075 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 STX3Q13277 289 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 MFAP5Q13361 173 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 ST13P4Q8IZP2 240 aaPredicted RBP24.08■■□□□ 1.45
TRIM28-204ENST00000594806 ZADH2Q8N4Q0 377 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 TEX19Q8NA77 164 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 MORN4Q8NDC4 146 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 RAB3IL1Q8TBN0 382 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 TWIST2Q8WVJ9 160 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 DGAT2Q96PD7 388 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 ILKAPQ9H0C8 392 aaPredicted RBP24.08■■□□□ 1.45
TRIM28-204ENST00000594806 C1orf109Q9NX04 203 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 ZDHHC2Q9UIJ5 367 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 ANAPC2Q9UJX6 822 aa24.08■■□□□ 1.45
TRIM28-204ENST00000594806 CELA2AP08217 269 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 DRD2P14416 443 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 ALOX15P16050 662 aaPredicted RBP24.07■■□□□ 1.44
TRIM28-204ENST00000594806 BGNP21810 368 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 PIK3R1P27986 724 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 SLC1A6P48664 564 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 C19orf57Q0VDD7 668 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 Q6ZSR9 355 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 LGI4Q8N135 537 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 ZNF843Q8N446 348 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 OR4K14Q8NGD5 310 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 VMP1Q96GC9 406 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 ZNF354BQ96LW1 612 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 TUBB1Q9H4B7 451 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 PTGFRNQ9P2B2 879 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 TMED5Q9Y3A6 229 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 RAP2CQ9Y3L5 183 aa24.07■■□□□ 1.44
TRIM28-204ENST00000594806 CROCCQ5TZA2 2017 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 SEC22BO75396 215 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 UQCRHP07919 91 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 ANXA4P09525 319 aaPredicted RBP24.06■■□□□ 1.44
TRIM28-204ENST00000594806 SLC35E2P0CK97 266 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 TNNI3P19429 210 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 NR1D1P20393 614 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 CLCN2P51788 898 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 HEPACAMQ14CZ8 416 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 ATG16L1Q676U5 607 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 SLC48A1Q6P1K1 146 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 OR4N5Q8IXE1 308 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 DDIASQ8IXT1 998 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 SLC5A8Q8N695 610 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 LRTM1Q9HBL6 345 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 HAO1Q9UJM8 370 aa24.06■■□□□ 1.44
TRIM28-204ENST00000594806 CPAMD8Q8IZJ3 1885 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 GLOD5A6NK44 160 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 C17orf105B2RV13 164 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 B8ZZF3 427 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 PGRMC2O15173 223 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 ITM2AO43736 263 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 PRKRAO75569 313 aaKnown RBP24.05■■□□□ 1.44
TRIM28-204ENST00000594806 C1QL1O75973 258 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 LINC00032P0C843 101 aa24.05■■□□□ 1.44
TRIM28-204ENST00000594806 GPR143P51810 404 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms