RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 TMEM229AB2RXF0 380 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 MPZL2O60487 215 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 HOXC4P09017 264 aaPredicted RBP13.58□□□□□ -0.24
RANBP3-229ENST00000592771 DRD1P21728 446 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 CRYBA2P53672 197 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 REEP5Q00765 189 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 PRKCDQ05655 676 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 MICAQ29983 383 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 ZNF605Q86T29 641 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 OR10G2Q8NGC3 310 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 OR4K1Q8NGD4 311 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 OR52N2Q8NGI0 321 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 CDC26Q8NHZ8 85 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 WDR48Q8TAF3 677 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 INSM2Q96T92 566 aaPredicted RBP13.58□□□□□ -0.24
RANBP3-229ENST00000592771 NRTNQ99748 197 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 ALOXE3Q9BYJ1 711 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 REEP4Q9H6H4 257 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 NT5DC2Q9H857 520 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 AASSQ9UDR5 926 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 TAC3Q9UHF0 121 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 PCDHGA2Q9Y5H1 932 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 KLK4Q9Y5K2 254 aa13.58□□□□□ -0.24
RANBP3-229ENST00000592771 SH3D21A4FU49 640 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 PRR23AA6NEV1 266 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 AGAP5A6NIR3 686 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 M0R082 166 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 KDM1AO60341 852 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 SEMA3DO95025 777 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 TBX6O95947 436 aaPredicted RBP13.57□□□□□ -0.24
RANBP3-229ENST00000592771 C1QCP02747 245 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 ALDH4A1P30038 563 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 SERPINB1P30740 379 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 LIPAP38571 399 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 HMGA2P52926 109 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 PPP2CBP62714 309 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 PPP2CAP67775 309 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 MRPS21P82921 87 aaKnown RBP13.57□□□□□ -0.24
RANBP3-229ENST00000592771 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.57□□□□□ -0.24
RANBP3-229ENST00000592771 GCNT6Q5T4J0 391 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 FAM71E1Q6IPT2 247 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 GALNT10Q86SR1 603 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 C2orf73Q8N5S3 287 aaPredicted RBP13.57□□□□□ -0.24
RANBP3-229ENST00000592771 LINC01555Q8NAE3 123 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 OR4A15Q8NGL6 344 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 C16orf78Q8WTQ4 265 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 GGHQ92820 318 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 MTERF3Q96E29 417 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 C12orf66Q96MD2 445 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 FEVQ99581 238 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 RHNO1Q9BSD3 238 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 C8orf33Q9H7E9 229 aaPredicted RBP13.57□□□□□ -0.24
RANBP3-229ENST00000592771 PIAS3Q9Y6X2 628 aa13.57□□□□□ -0.24
RANBP3-229ENST00000592771 COQ9O75208 318 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TNFRSF21O75509 655 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 SNX4O95219 450 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 FURINP09958 794 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 GABRB1P18505 474 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 CXCR2P25025 360 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 ALDH9A1P49189 494 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 KIAA1024LP59773 190 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 ZNF630Q2M218 657 aaPredicted RBP13.56□□□□□ -0.24
RANBP3-229ENST00000592771 INAVAQ3KP66 663 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TIMM50Q3ZCQ8 353 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 ZNF385BQ569K4 471 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 CRB2Q5IJ48 1285 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 GPR153Q6NV75 609 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TRIM40Q6P9F5 258 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 IKBIPQ70UQ0 350 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TSEN54Q7Z6J9 526 aaKnown RBP13.56□□□□□ -0.24
RANBP3-229ENST00000592771 SLC9B2Q86UD5 537 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 SLC22A16Q86VW1 577 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 NAGSQ8N159 534 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 SPPL2AQ8TCT8 520 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 RPL3LQ92901 407 aaKnown RBP13.56□□□□□ -0.24
RANBP3-229ENST00000592771 SIPA1Q96FS4 1042 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 CAMK1GQ96NX5 476 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 KCNC2Q96PR1 638 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 MAPKAP1Q9BPZ7 522 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 AIF1LQ9BQI0 150 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 ACAT2Q9BWD1 397 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 ZNF556Q9HAH1 456 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 CUEDC1Q9NWM3 386 aaPredicted RBP13.56□□□□□ -0.24
RANBP3-229ENST00000592771 CNOT2Q9NZN8 540 aaKnown RBP13.56□□□□□ -0.24
RANBP3-229ENST00000592771 SCHIP1Q9P0W5 487 aaPredicted RBP13.56□□□□□ -0.24
RANBP3-229ENST00000592771 PCDHGA4Q9Y5G9 962 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 PEX16Q9Y5Y5 336 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 GPC6Q9Y625 555 aaPredicted RBP13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TMEM265A0A087WTH1 108 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TBC1D3DA0A087WVF3 549 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TBC1D3IA0A087WXS9 549 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TBC1D3EA0A087X179 549 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TBC1D3KA0A087X1G2 549 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TBC1D3FA6NER0 549 aaPredicted RBP13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TBC1D3LB9A6J9 549 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 CACNB4O00305 520 aaPredicted RBP13.56□□□□□ -0.24
RANBP3-229ENST00000592771 GCM2O75603 506 aaPredicted RBP13.56□□□□□ -0.24
RANBP3-229ENST00000592771 NUDT7P0C024 238 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 TBC1D3HP0C7X1 549 aa13.56□□□□□ -0.24
RANBP3-229ENST00000592771 PKLRP30613 574 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms