RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 BTBD16Q32M84 506 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 CCSMST1Q4G0I0 132 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 DPY19L3Q6ZPD9 716 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 USP45Q70EL2 814 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 OR52I1Q8NGK6 324 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 ASZ1Q8WWH4 475 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 SOCS4Q8WXH5 440 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 VOPP1Q96AW1 172 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 ZC3HAV1LQ96H79 300 aaKnown RBP17.12■□□□□ 0.33
SPC24-206ENST00000592540 MED18Q9BUE0 208 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 KATNB1Q9BVA0 655 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 RBFOX1Q9NWB1 397 aaKnown RBP17.12■□□□□ 0.33
SPC24-206ENST00000592540 GULP1Q9UBP9 304 aa17.12■□□□□ 0.33
SPC24-206ENST00000592540 DIMT1Q9UNQ2 313 aaKnown RBP17.12■□□□□ 0.33
SPC24-206ENST00000592540 YARS2Q9Y2Z4 477 aaKnown RBP17.12■□□□□ 0.33
SPC24-206ENST00000592540 SPIN1Q9Y657 262 aaPredicted RBP17.12■□□□□ 0.33
SPC24-206ENST00000592540 ZSCAN5BA6NJL1 495 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 PROM1O43490 865 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 HCN1O60741 890 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 ADAMTS4O75173 837 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 SRPRAP08240 638 aaKnown RBP17.11■□□□□ 0.33
SPC24-206ENST00000592540 RPL17P18621 184 aaKnown RBP17.11■□□□□ 0.33
SPC24-206ENST00000592540 ELAVL4P26378 380 aaKnown RBP17.11■□□□□ 0.33
SPC24-206ENST00000592540 SOAT1P35610 550 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 ETV5P41161 510 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 ETV1P50549 477 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 SNRPD2P62316 118 aaKnown RBP17.11■□□□□ 0.33
SPC24-206ENST00000592540 C2orf80Q0P641 193 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 PDE7AQ13946 482 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 ATAT1Q5SQI0 421 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 PDZD3Q86UT5 571 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 TMEM173Q86WV6 379 aaPredicted RBP17.11■□□□□ 0.33
SPC24-206ENST00000592540 REM2Q8IYK8 340 aaPredicted RBP17.11■□□□□ 0.33
SPC24-206ENST00000592540 HS6ST3Q8IZP7 471 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 ZNF557Q8N988 423 aaPredicted RBP17.11■□□□□ 0.33
SPC24-206ENST00000592540 C19orf18Q8NEA5 215 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 OR4M1Q8NGD0 313 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 AP3S1Q92572 193 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.333e-17■■■■■ 39.6
SPC24-206ENST00000592540 FOXJ1Q92949 421 aa17.11■□□□□ 0.33
SPC24-206ENST00000592540 ZBED6CLQ96FA7 236 aaPredicted RBP17.11■□□□□ 0.33
SPC24-206ENST00000592540 POLR2J3Q9H1A7 115 aaKnown RBP17.11■□□□□ 0.33
SPC24-206ENST00000592540 PSIP1O75475 530 aaKnown RBP17.1■□□□□ 0.33
SPC24-206ENST00000592540 OR2B3O76000 313 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 SLC2A2P11168 524 aaPredicted RBP17.1■□□□□ 0.33
SPC24-206ENST00000592540 CKBP12277 381 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 IFNA8P32881 189 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 STK19P49842 368 aaPredicted RBP17.1■□□□□ 0.33
SPC24-206ENST00000592540 DSTNP60981 165 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 TARDBPQ13148 414 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPC24-206ENST00000592540 DCST1Q5T197 706 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 TRIQKQ629K1 86 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 ZNF730Q6ZMV8 503 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 ZNF767PQ75MW2 155 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 COMMD6Q7Z4G1 85 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 CCDC28AQ8IWP9 274 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 CELF5Q8N6W0 485 aaKnown RBP17.1■□□□□ 0.33
SPC24-206ENST00000592540 DUSP18Q8NEJ0 188 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 OR2AP1Q8NGE2 309 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 TMEM39AQ9NV64 488 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 CLCA3PQ9Y6N3 262 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 SEMA7AO75326 666 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 SLCO2B1O94956 709 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 RAB36O95755 333 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 OPRD1P41143 372 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 SPINT3P49223 89 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 PLD1Q13393 1074 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 PRSS53Q2L4Q9 553 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 PLK5Q496M5 336 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 RPS26P11Q5JNZ5 115 aaPredicted RBP17.1■□□□□ 0.33
SPC24-206ENST00000592540 WDR45BQ5MNZ6 344 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 REEP3Q6NUK4 255 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 MZT2BQ6NZ67 158 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 MED27Q6P2C8 311 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 ARMCX6Q7L4S7 300 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 ABI3BPQ7Z7G0 1075 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 LAPTM4BQ86VI4 370 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 SLC30A8Q8IWU4 369 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 Q8N402 240 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 SYT14Q8NB59 555 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 GTPBP2Q9BX10 602 aaKnown RBP17.1■□□□□ 0.33
SPC24-206ENST00000592540 GPBP1L1Q9HC44 474 aaPredicted RBP17.1■□□□□ 0.33
SPC24-206ENST00000592540 TMEM161AQ9NX61 479 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 ING3Q9NXR8 418 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 TVP23BQ9NYZ1 205 aa17.1■□□□□ 0.33
SPC24-206ENST00000592540 TRAV19A0A0A6YYK7 116 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 LOC105371267A0A1B0GV96 52 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 TMEM202A6NGA9 273 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 TLX2O43763 284 aaPredicted RBP17.09■□□□□ 0.33
SPC24-206ENST00000592540 SGTAO43765 313 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 PRKYO43930 277 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 FAM157BP0CG42 384 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 OR1D2P34982 312 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 RPS25P62851 125 aaKnown RBP17.09■□□□□ 0.33
SPC24-206ENST00000592540 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
SPC24-206ENST00000592540 LAMTOR1Q6IAA8 161 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 KIAA1841Q6NSI8 718 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 CREB3L2Q70SY1 520 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 C11orf74Q86VG3 221 aa17.09■□□□□ 0.33
SPC24-206ENST00000592540 IQCF1Q8N6M8 205 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 380.6 ms