RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 OR5L2Q8NGL0 311 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 ZNF473Q8WTR7 871 aaKnown RBP16.98■□□□□ 0.31
CCDC43-204ENST00000588687 SARAFQ96BY9 339 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 SH3GL2Q99962 352 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 GPATCH1Q9BRR8 931 aaKnown RBP16.98■□□□□ 0.31
CCDC43-204ENST00000588687 CAB39LQ9H9S4 337 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 WWOXQ9NZC7 414 aa16.98■□□□□ 0.31
CCDC43-204ENST00000588687 KIAA1549Q9HCM3 1950 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 TRGV5A0A0B4J1U4 118 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 P04436 131 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 HIST1H1TP22492 207 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-204ENST00000588687 SLC10A1Q14973 349 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 TBCCQ15814 346 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 PDK4Q16654 411 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 NAXEQ8NCW5 288 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 SPACA9Q96E40 222 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-204ENST00000588687 TBCDQ9BTW9 1192 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 RASSF1Q9NS23 344 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 CRIM1Q9NZV1 1036 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 PTBP2Q9UKA9 531 aaKnown RBP16.97■□□□□ 0.31
CCDC43-204ENST00000588687 ACAD8Q9UKU7 415 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 PCDHGB3Q9Y5G1 929 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 CHCHD2Q9Y6H1 151 aaPredicted RBP16.97■□□□□ 0.31
CCDC43-204ENST00000588687 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.97■□□□□ 0.31
CCDC43-204ENST00000588687 EXPH5Q8NEV8 1989 aa16.97■□□□□ 0.31
CCDC43-204ENST00000588687 FREM3P0C091 2139 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 KDM4EB2RXH2 506 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-204ENST00000588687 CLGNO14967 610 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 PHGDHO43175 533 aaKnown RBP16.96■□□□□ 0.31
CCDC43-204ENST00000588687 STK16O75716 305 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 CD1DP15813 335 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 KLK2P20151 261 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 CASP2P42575 452 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 STT3AP46977 705 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 ARL4CP56559 192 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 ZKSCAN8Q15776 578 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-204ENST00000588687 WLSQ5T9L3 541 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 PRAMEF20Q5VT98 475 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 SULT1C3Q6IMI6 304 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 POMZP3Q6PJE2 187 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 WDR53Q7Z5U6 358 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-204ENST00000588687 LAS2Q8IYD9 372 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 ULK2Q8IYT8 1036 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 BBOF1Q8ND07 529 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 SENP5Q96HI0 755 aaPredicted RBP16.96■□□□□ 0.31
CCDC43-204ENST00000588687 FBXL20Q96IG2 436 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 POLDIP3Q9BY77 421 aaKnown RBP16.96■□□□□ 0.31
CCDC43-204ENST00000588687 ROGDIQ9GZN7 287 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 SLC6A15Q9H2J7 730 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 CNOT10Q9H9A5 744 aaKnown RBP16.96■□□□□ 0.31
CCDC43-204ENST00000588687 COPS7AQ9UBW8 275 aa16.96■□□□□ 0.31
CCDC43-204ENST00000588687 MTO1Q9Y2Z2 717 aaKnown RBP16.96■□□□□ 0.31
CCDC43-204ENST00000588687 C1QAP02745 245 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 GABRA1P14867 456 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 MSH2P43246 934 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 POU4F1Q01851 419 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 TGM3Q08188 693 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 PDIA2Q13087 525 aaKnown RBP16.95■□□□□ 0.3
CCDC43-204ENST00000588687 SYDE1Q6ZW31 735 aaPredicted RBP16.95■□□□□ 0.3
CCDC43-204ENST00000588687 GPSM1Q86YR5 675 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 OR4N5Q8IXE1 308 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 FBXW8Q8N3Y1 598 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 SNX31Q8N9S9 440 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 UBXN10Q96LJ8 280 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 RUNDC3BQ96NL0 473 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 SORBS1Q9BX66 1292 aaKnown RBP16.95■□□□□ 0.3
CCDC43-204ENST00000588687 CLEC4MQ9H2X3 399 aaPredicted RBP16.95■□□□□ 0.3
CCDC43-204ENST00000588687 LDAHQ9H6V9 325 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 ZFP64Q9NPA5 681 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 ACKR4Q9NPB9 350 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 NSMCE4AQ9NXX6 385 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 B4GALT7Q9UBV7 327 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 CNOT11Q9UKZ1 510 aaKnown RBP16.95■□□□□ 0.3
CCDC43-204ENST00000588687 NINQ8N4C6 2090 aa16.95■□□□□ 0.3
CCDC43-204ENST00000588687 CXorf49A8MYA2 514 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-204ENST00000588687 SYT5O00445 386 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 PROM1O43490 865 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 CLPSP04118 112 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 FBXO45P0C2W1 286 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 CCDC166P0CW27 439 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 TNNI3P19429 210 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 GMPRP36959 345 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 DR1Q01658 176 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 PCDH1Q08174 1060 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 FOXD4Q12950 439 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-204ENST00000588687 CHIT1Q13231 466 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 CEBPEQ15744 281 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 FBXL19-AS1Q494R0 122 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 TMEM35AQ53FP2 167 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 SLC22A10Q63ZE4 541 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 LRRC70Q7Z2Q7 622 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 CHDHQ8NE62 594 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-204ENST00000588687 SRFBP1Q8NEF9 429 aaKnown RBP16.94■□□□□ 0.3
CCDC43-204ENST00000588687 OR10G3Q8NGC4 313 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 NEIL3Q8TAT5 605 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 GPR22Q99680 433 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 ZNF717Q9BY31 904 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-204ENST00000588687 QPCTLQ9NXS2 382 aa16.94■□□□□ 0.3
CCDC43-204ENST00000588687 FAM47E-STBD1D6RA91 191 aa16.93■□□□□ 0.3
CCDC43-204ENST00000588687 PRKRAO75569 313 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms