RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 HCN4Q9Y3Q4 1203 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 ASCC3Q8N3C0 2202 aaKnown RBP24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 ARPC2O15144 300 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 PSMG1O95456 288 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 CD59P13987 128 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 ATP6V1B2P21281 511 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 PPIBP23284 216 aaKnown RBP24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 NTSP30990 170 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 MVDP53602 400 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 SKP1P63208 163 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 SIM1P81133 766 aaPredicted RBP24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 SHC2P98077 582 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 ABHD18Q0P651 414 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 DHFR2Q86XF0 187 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 TMEM52Q8NDY8 209 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 OR2T12Q8NG77 320 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 CCDC74BQ96LY2 380 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 BBS4Q96RK4 519 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 GFM1Q96RP9 751 aaKnown RBP24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 SLC35A5Q9BS91 424 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 FGF21Q9NSA1 209 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 GPATCH2Q9NW75 528 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 PSME2Q9UL46 239 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 SPACA6W5XKT8 324 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 OTOGLQ3ZCN5 2332 aa24.54■■□□□ 1.52
SCAMP4-210ENST00000588555 CHST10O43529 356 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 CDK9P50750 372 aaKnown RBP24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 RAB38P57729 211 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 HSPB3Q12988 150 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 LCN8Q6JVE9 175 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 SERPINA11Q86U17 422 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 SLITRK4Q8IW52 837 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 RCBTB1Q8NDN9 531 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 PNPT1Q8TCS8 783 aaKnown RBP24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 STMN2Q93045 179 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 FAM120BQ96EK7 910 aaKnown RBP24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 EPS8L2Q9H6S3 715 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 BCAP29Q9UHQ4 241 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 ACSL6Q9UKU0 697 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 ENTPD4Q9Y227 616 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 SNX13Q9Y5W8 968 aa24.53■■□□□ 1.52
SCAMP4-210ENST00000588555 FAM220BPB1ANY3 271 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 D6RAR5 112 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 GP1BAP07359 652 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 C8orf89P0DMQ9 161 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 UQCRC2P22695 453 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 NCBP2P52298 156 aaKnown RBP eCLIP24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 CYP2R1Q6VVX0 501 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 OR5AK3PQ8NH89 298 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 SLC26A7Q8TE54 656 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 LRFN3Q9BTN0 628 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 CHST8Q9H2A9 424 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 DCLRE1BQ9H816 532 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 RNPEPL1Q9HAU8 725 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 CUTCQ9NTM9 273 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 TMEM184BQ9Y519 407 aaPredicted RBP24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 CSNK2A2P19784 350 aaPredicted RBP24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 SOX11P35716 441 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 FEN1P39748 380 aaKnown RBP24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 ITGA1P56199 1179 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 SPEM2Q0P670 501 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 FAM214AQ32MH5 1076 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 EDEM2Q9BV94 578 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 CLK4Q9HAZ1 481 aaKnown RBP24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 FTSJ1Q9UET6 329 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 CORO2BQ9UQ03 480 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 CUL9Q8IWT3 2517 aa24.52■■□□□ 1.52
SCAMP4-210ENST00000588555 FAM227AF5H4B4 570 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 NTRK1P04629 796 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 NCK1P16333 377 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 SOAT1P35610 550 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 SPIDRQ14159 915 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 RGNQ15493 299 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 TLDC1Q6P9B6 456 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 CCDC116Q8IYX3 515 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 ENDOVQ8N8Q3 282 aaKnown RBP24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 ZFP28Q8NHY6 868 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 ATOH1Q92858 354 aaPredicted RBP24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 REXO5Q96IC2 774 aaKnown RBP24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 GIMAP4Q9NUV9 329 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 HCN3Q9P1Z3 774 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 NKX1-2Q9UD57 310 aaPredicted RBP24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 SERTAD3Q9UJW9 196 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 SNX8Q9Y5X2 465 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 ZNF780BQ9Y6R6 833 aa24.51■■□□□ 1.51
SCAMP4-210ENST00000588555 ELOVL7A1L3X0 281 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 H0YIG0 161 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 FKBP6O75344 327 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 LMNAP02545 664 aaKnown RBP24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 C8BP07358 591 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 GGT1P19440 569 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 AVPR1BP47901 424 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 PRAMEF17Q5VTA0 474 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 AAGABQ6PD74 315 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 MICU2Q8IYU8 434 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 GPR135Q8IZ08 494 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 OR4K14Q8NGD5 310 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 OR52N2Q8NGI0 321 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 PYDC1Q8WXC3 89 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 DPH2Q9BQC3 489 aaPredicted RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms