RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CCL3P10147 92 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 CNR1P21554 472 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 ELAVL4P26378 380 aaKnown RBP13.27□□□□□ -0.29
VMP1-206ENST00000587945 SERPINB1P30740 379 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 PIK3CBP42338 1070 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 STT3AP46977 705 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 PIK3CGP48736 1102 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 DNASE1L1P49184 302 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 IGLV3-21P80748 117 aaPredicted RBP13.27□□□□□ -0.29
VMP1-206ENST00000587945 FOLH1Q04609 750 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 FAM83EQ2M2I3 478 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 EMC4Q5J8M3 183 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 ARHGAP11AQ6P4F7 1023 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 RTL4Q6ZR62 310 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 ZNF572Q7Z3I7 529 aaPredicted RBP13.27□□□□□ -0.29
VMP1-206ENST00000587945 GPR180Q86V85 440 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 C9orf40Q8IXQ3 194 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 EID3Q8N140 333 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 OR5L2Q8NGL0 311 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 OR5M9Q8NGP3 310 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 OR8K3Q8NH51 312 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 RHEBL1Q8TAI7 183 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 UCN3Q969E3 161 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 GPR78Q96P69 363 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 LRRC1Q9BTT6 524 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 COQ3Q9NZJ6 369 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 CPSF2Q9P2I0 782 aaKnown RBP13.27□□□□□ -0.29
VMP1-206ENST00000587945 COPS7AQ9UBW8 275 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 RNF11Q9Y3C5 154 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 LIPGQ9Y5X9 500 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 APCP25054 2843 aa13.27□□□□□ -0.29
VMP1-206ENST00000587945 CSMD2Q7Z408 3487 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 GLOD5A6NK44 160 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 ACOT7O00154 380 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 TMPRSS11DO60235 418 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 GLSO94925 669 aaPredicted RBP13.26□□□□□ -0.29
VMP1-206ENST00000587945 KLHL2O95198 593 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 ALDOAP04075 364 aaKnown RBP13.26□□□□□ -0.29
VMP1-206ENST00000587945 IGKV3-11P04433 115 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 COX7A2P14406 83 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 MAGEA5P43359 124 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 NEK2P51955 445 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 ALDH18A1P54886 795 aaKnown RBP13.26□□□□□ -0.29
VMP1-206ENST00000587945 KRTAP10-9P60411 292 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 TNFRSF17Q02223 184 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 GTF2H2Q13888 395 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 ACAP2Q15057 778 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 CPSF6Q16630 551 aaKnown RBP eCLIP13.26□□□□□ -0.29
VMP1-206ENST00000587945 PIGGQ5H8A4 983 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 LIPJQ5W064 366 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 GTF2H2CQ6P1K8 395 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 OPN5Q6U736 354 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 FAM47EQ6ZV65 393 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 GOLGA7Q7Z5G4 137 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 SLC22A16Q86VW1 577 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 PLD6Q8N2A8 252 aaKnown RBP13.26□□□□□ -0.29
VMP1-206ENST00000587945 ZCCHC7Q8N3Z6 543 aaKnown RBP13.26□□□□□ -0.29
VMP1-206ENST00000587945 TMEM251Q8N6I4 163 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 TANKQ92844 425 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 RBM18Q96H35 190 aaKnown RBP13.26□□□□□ -0.29
VMP1-206ENST00000587945 SGCZQ96LD1 299 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 FAM173AQ9BQD7 235 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 CENPKQ9BS16 269 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 ZNF717Q9BY31 904 aaPredicted RBP13.26□□□□□ -0.29
VMP1-206ENST00000587945 UCK2Q9BZX2 261 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 VPS11Q9H270 941 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 TP63Q9H3D4 680 aaPredicted RBP13.26□□□□□ -0.29
VMP1-206ENST00000587945 IPPKQ9H8X2 491 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 ZDHHC11Q9H8X9 412 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 SEMA4BQ9NPR2 832 aaPredicted RBP13.26□□□□□ -0.29
VMP1-206ENST00000587945 PKDREJQ9NTG1 2253 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 ZNF358Q9NW07 568 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 TUBA8Q9NY65 449 aaPredicted RBP13.26□□□□□ -0.29
VMP1-206ENST00000587945 NINJ2Q9NZG7 142 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 TNFRSF10DQ9UBN6 386 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 ADGRE2Q9UHX3 823 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 PCDHGA11Q9Y5H2 935 aa13.26□□□□□ -0.29
VMP1-206ENST00000587945 A0A1W2PR48 441 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 FAM90A27PA6NNH2 459 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 PROM1O43490 865 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 KLK8O60259 260 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 NADKO95544 446 aaPredicted RBP13.25□□□□□ -0.29
VMP1-206ENST00000587945 GBAP04062 536 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 P04436 131 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 CELA3AP09093 270 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 ALOX15P16050 662 aaPredicted RBP13.25□□□□□ -0.29
VMP1-206ENST00000587945 PTX3P26022 381 aaPredicted RBP13.25□□□□□ -0.29
VMP1-206ENST00000587945 TYK2P29597 1187 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 BSGP35613 385 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 PIGAP37287 484 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 HERVK_113P63132 956 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 ERVK-8P63133 956 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 PLIN5Q00G26 463 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 PMPCAQ10713 525 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 FOXO1Q12778 655 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 PCBP2Q15366 365 aaKnown RBP eCLIP13.25□□□□□ -0.29
VMP1-206ENST00000587945 MPEG1Q2M385 716 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 GXYLT1Q4G148 440 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 TMEM211Q6ICI0 200 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 MRM1Q6IN84 353 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms