RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 TBCCQ15814 346 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 MPEG1Q2M385 716 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 TMEM35AQ53FP2 167 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 PRAMEF20Q5VT98 475 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 SLC22A10Q63ZE4 541 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 OR4C11Q6IEV9 310 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 MED27Q6P2C8 311 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 DGAT2L6Q6ZPD8 337 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 RNF175Q8N4F7 328 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 CDKL2Q92772 493 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 SARAFQ96BY9 339 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 RBBP8Q99708 897 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 OR51B5Q9H339 312 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 ALG9Q9H6U8 611 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 SAR1BQ9Y6B6 198 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 MED13LQ71F56 2210 aa13.07□□□□□ -0.32
ERCC1-205ENST00000587888 SUPT3HB4E1H0 165 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 CCDC188H7C350 402 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 SUPT3HO75486 399 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 FAM155BO75949 473 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 NADKO95544 446 aaPredicted RBP13.06□□□□□ -0.32
ERCC1-205ENST00000587888 RFPL3SP0C7P2 107 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 DNAJA1P31689 397 aaKnown RBP13.06□□□□□ -0.32
ERCC1-205ENST00000587888 ADH7P40394 386 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 CASP2P42575 452 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 STT3AP46977 705 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 DLX5P56178 289 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 ILF2Q12905 390 aaKnown RBP13.06□□□□□ -0.32
ERCC1-205ENST00000587888 DDX39BQ13838 428 aaKnown RBP13.06□□□□□ -0.32
ERCC1-205ENST00000587888 HYAL4Q2M3T9 481 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 ZNF791Q3KP31 576 aaPredicted RBP13.06□□□□□ -0.32
ERCC1-205ENST00000587888 KHDRBS2Q5VWX1 349 aaKnown RBP13.06□□□□□ -0.32
ERCC1-205ENST00000587888 C18orf63Q68DL7 685 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 C3orf62Q6ZUJ4 267 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 RAPH1Q70E73 1250 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 WDR53Q7Z5U6 358 aaPredicted RBP13.06□□□□□ -0.32
ERCC1-205ENST00000587888 CTAGE3PQ8IX95 158 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 C9orf40Q8IXQ3 194 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 LAS2Q8IYD9 372 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 PDPRQ8NCN5 879 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 OR7G3Q8NG95 312 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 STAG3L4Q8TBR4 150 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 SLC22A8Q8TCC7 542 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 UBE2E3Q969T4 207 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 CMTM7Q96FZ5 175 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 UBXN10Q96LJ8 280 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 JSRP1Q96MG2 331 aaPredicted RBP13.06□□□□□ -0.32
ERCC1-205ENST00000587888 GPR22Q99680 433 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 CPNE1Q99829 537 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 DPH5Q9H2P9 285 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 RPF2Q9H7B2 306 aaKnown RBP13.06□□□□□ -0.32
ERCC1-205ENST00000587888 SLC24A3Q9HC58 644 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 DNAJB12Q9NXW2 375 aaKnown RBP13.06□□□□□ -0.32
ERCC1-205ENST00000587888 POLQO75417 2590 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 ADGRG4Q8IZF6 3080 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 TACC2O95359 2948 aa13.06□□□□□ -0.32
ERCC1-205ENST00000587888 IQANK1A0A1B0GTG1 560 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 WASHC1A8K0Z3 465 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 DYRK3O43781 588 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 HCN1O60741 890 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 WDR1O75083 606 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 PRKRAO75569 313 aaKnown RBP13.05□□□□□ -0.32
ERCC1-205ENST00000587888 KRT38O76015 456 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 LRATO95237 230 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 GP5P40197 560 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 TRPC1P48995 793 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 RAP1GDS1P52306 607 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 IST1P53990 364 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 RAB10P61026 200 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 KCNJ2P63252 427 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 FOLH1Q04609 750 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 ZNF267Q14586 743 aaPredicted RBP13.05□□□□□ -0.32
ERCC1-205ENST00000587888 C1orf185Q5T7R7 199 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 DEPDC1Q5TB30 811 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 ARSKQ6UWY0 536 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 LRRC70Q7Z2Q7 622 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 ISCA2Q86U28 154 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 GPR180Q86V85 440 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 MYLK4Q86YV6 388 aaPredicted RBP13.05□□□□□ -0.32
ERCC1-205ENST00000587888 ZZZ3Q8IYH5 903 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 BBOF1Q8ND07 529 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 FAM13CQ8NE31 585 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 MYRIPQ8NFW9 859 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 NUBPLQ8TB37 319 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 TANKQ92844 425 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 RGMAQ96B86 450 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 GAL3ST4Q96RP7 486 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 KCNF1Q9H3M0 494 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 SPRR3Q9UBC9 169 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 OPTCQ9UBM4 332 aa13.05□□□□□ -0.32
ERCC1-205ENST00000587888 INTS1Q8N201 2190 aaKnown RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 TCRBV9S1A1TA0A576 114 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 GLOD5A6NK44 160 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 K7EPI3 171 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 UBXN8O00124 270 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 IGKV3-11P04433 115 aa13.04□□□□□ -0.32
ERCC1-205ENST00000587888 ALOX15P16050 662 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 ENDOUP21128 410 aaKnown RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 TLX1P31314 330 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-205ENST00000587888 SPRP35270 261 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms