RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 MAGIXQ9H6Y5 334 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 COQ10BQ9H8M1 238 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 EPHA6Q9UF33 1036 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 RPS6KA6Q9UK32 745 aa18.75■□□□□ 0.59
TRIM47-204ENST00000587339 ZNF860A6NHJ4 632 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 C8orf89P0DMQ9 161 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 ZNF26P17031 533 aaPredicted RBP18.74■□□□□ 0.59
TRIM47-204ENST00000587339 CKMT2P17540 419 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 CSNK2A2P19784 350 aaPredicted RBP18.74■□□□□ 0.59
TRIM47-204ENST00000587339 FEN1P39748 380 aaKnown RBP18.74■□□□□ 0.59
TRIM47-204ENST00000587339 COL9A2Q14055 689 aaPredicted RBP18.74■□□□□ 0.59
TRIM47-204ENST00000587339 ZNF750Q32MQ0 723 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 PRSS41Q7RTY9 318 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 C6orf120Q7Z4R8 191 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 CCDC116Q8IYX3 515 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 DNAJC22Q8N4W6 341 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 SUN3Q8TAQ9 357 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 NAALAD2Q9Y3Q0 740 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 TXNDC9O14530 226 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 CLOCKO15516 846 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 GALR3O60755 368 aaPredicted RBP18.74■□□□□ 0.59
TRIM47-204ENST00000587339 DEAF1O75398 565 aaPredicted RBP18.74■□□□□ 0.59
TRIM47-204ENST00000587339 OLR1P78380 273 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 TP53BP2Q13625 1128 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 ZBTB49Q6ZSB9 765 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 SZRD1Q7Z422 152 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 GALNT10Q86SR1 603 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 OR10Q1Q8NGQ4 319 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 LYRM4Q9HD34 91 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 SEMA3GQ9NS98 782 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 SOHLH2Q9NX45 425 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 ZSCAN32Q9NX65 697 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 SPACA6W5XKT8 324 aa18.74■□□□□ 0.59
TRIM47-204ENST00000587339 IGHV5-51A0A0C4DH38 117 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 TMEM221A6NGB7 291 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 SAC3D1A6NKF1 404 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 M0R296 226 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 DNAJB6O75190 326 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 EPHA8P29322 1005 aaPredicted RBP18.73■□□□□ 0.59
TRIM47-204ENST00000587339 AQP1P29972 269 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 MLLT3P42568 568 aaPredicted RBP18.73■□□□□ 0.59
TRIM47-204ENST00000587339 OR1D5P58170 312 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 DSTNP60981 165 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 SCARB2Q14108 478 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 CEBPEQ15744 281 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 NRF1Q16656 503 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 ZNF630Q2M218 657 aaPredicted RBP18.73■□□□□ 0.59
TRIM47-204ENST00000587339 CEACAM20Q6UY09 585 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 TMEM105Q8N8V8 129 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 BTBD9Q96Q07 612 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 CD180Q99467 661 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 KLHL3Q9UH77 587 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 OAZ3Q9UMX2 235 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 AK5Q9Y6K8 562 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 SCN3AQ9NY46 2000 aa18.73■□□□□ 0.59
TRIM47-204ENST00000587339 IGHV1OR21-1A0A087WYE8 117 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 CTSBP07858 339 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 GPR3P46089 330 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 RPS26P62854 115 aaKnown RBP18.72■□□□□ 0.59
TRIM47-204ENST00000587339 CDK6Q00534 326 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 INTS11Q5TA45 600 aaKnown RBP18.72■□□□□ 0.59
TRIM47-204ENST00000587339 OR52E8Q6IFG1 317 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 CBLL1Q75N03 491 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 CEP68Q76N32 757 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 NFKBIDQ8NI38 313 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 VPS50Q96JG6 964 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 C10orf90Q96M02 699 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 ZNF681Q96N22 645 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 CSF3RQ99062 836 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 EPB41L1Q9H4G0 881 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 PDE7BQ9NP56 450 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 PRDM9Q9NQV7 894 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 ZCCHC3Q9NUD5 404 aaKnown RBP18.72■□□□□ 0.59
TRIM47-204ENST00000587339 TMEM131Q92545 1883 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 A0A1W2PS29 197 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 B4GALT2O60909 372 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 ALPPL2P10696 532 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 UQCRBP14927 111 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 DUSP2Q05923 314 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 SWT1Q5T5J6 900 aaKnown RBP18.72■□□□□ 0.59
TRIM47-204ENST00000587339 TNFAIP8L2Q6P589 184 aaPredicted RBP18.72■□□□□ 0.59
TRIM47-204ENST00000587339 EIF3MQ7L2H7 374 aaKnown RBP18.72■□□□□ 0.59
TRIM47-204ENST00000587339 GATAD2AQ86YP4 633 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 ZC3H7AQ8IWR0 971 aaKnown RBP18.72■□□□□ 0.59
TRIM47-204ENST00000587339 SAMD14Q8IZD0 417 aaPredicted RBP18.72■□□□□ 0.59
TRIM47-204ENST00000587339 SLC29A1Q99808 456 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 C9orf16Q9BUW7 83 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 DUSP23Q9BVJ7 150 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 ANKHQ9HCJ1 492 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 NLGN3Q9NZ94 848 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 PLCL2Q9UPR0 1127 aa18.72■□□□□ 0.59
TRIM47-204ENST00000587339 A0A1B0GTQ1 180 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 DUX1O43812 170 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 ZBTB11O95625 1053 aaPredicted RBP18.71■□□□□ 0.59
TRIM47-204ENST00000587339 CST1P01037 141 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 PTGER1P34995 402 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 SIM1P81133 766 aaPredicted RBP18.71■□□□□ 0.59
TRIM47-204ENST00000587339 PRTGQ2VWP7 1150 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 AMZ1Q400G9 498 aa18.71■□□□□ 0.59
TRIM47-204ENST00000587339 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms