RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	TRAPPC5	Q8IUR0	188 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	ARL14	Q8N4G2	192 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792		Q8N9G6	341 aa	Predicted RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	DNAAF3	Q8N9W5	541 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TNIP2	Q8NFZ5	429 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TSPEAR	Q8WU66	669 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	ANKRD7	Q92527	254 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	GLYATL1	Q969I3	302 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	C3orf49	Q96BT1	292 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	PPP1R14B	Q96C90	147 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	NRBF2	Q96F24	287 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	DCUN1D1	Q96GG9	259 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	PDLIM5	Q96HC4	596 aa	Known RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	HES6	Q96HZ4	224 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	NSMCE3	Q96MG7	304 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	VPS35	Q96QK1	796 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	SMIM14	Q96QK8	99 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TRIB3	Q96RU7	358 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	SH3GL2	Q99962	352 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TBL1Y	Q9BQ87	522 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	ACPT	Q9BZG2	426 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	KLHL4	Q9C0H6	718 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	OR2AG1	Q9H205	316 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	CARD9	Q9H257	536 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	MANSC1	Q9H8J5	431 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	LRRC40	Q9H9A6	602 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	EPB41L5	Q9HCM4	733 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	BPIFA1	Q9NP55	256 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	THSD1	Q9NS62	852 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC35D1	Q9NTN3	355 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	ATAD3A	Q9NVI7	634 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TAAR2	Q9P1P5	351 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	TEKT2	Q9UIF3	430 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	CRLS1	Q9UJA2	301 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	APPL1	Q9UKG1	709 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	HSF4	Q9ULV5	492 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC17A4	Q9Y2C5	497 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	CAPN7	Q9Y6W3	813 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	DMXL1	Q9Y485	3027 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	CEP250	Q9BV73	2442 aa		4.5	□□□□□ -1.69
ZNF540-204	ENST00000586792	FRYL	O94915	3013 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	ASCC3	Q8N3C0	2202 aa	Known RBP	4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	DOCK9	Q9BZ29	2069 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	LOC285095	A0A1B0GVY8	99 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	hCG_1809904	A0A1W2PP81	198 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792		A0A1W2PPE2	198 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792		A0A1W2PR64	198 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792		A4D1N5	150 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	C5orf60	A6NFR6	353 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	OR5K4	A6NMS3	321 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	ERI2	A8K979	691 aa	Known RBP	4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	FAM171A2	A8MVW0	826 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	MYO1G	B0I1T2	1018 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792		D6RAR5	112 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	PRSS44	E7EML9	344 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	KMO	O15229	486 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	DUX1	O43812	170 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	CDK14	O94921	469 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	AGFG2	O95081	481 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	NXPH3	O95157	252 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	CPNE6	O95741	557 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	SOD1	P00441	154 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	VIP	P01282	170 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	SPARC	P09486	303 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	F3	P13726	295 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	CCNA2	P20248	432 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	ITGAL	P20701	1170 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	IDS	P22304	550 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	PTAFR	P25105	342 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	KRTAP5-9	P26371	169 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	AK4	P27144	223 aa	Predicted RBP	4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	BSG	P35613	385 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	FDFT1	P37268	417 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	PNLIPRP1	P54315	467 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	ALDH18A1	P54886	795 aa	Known RBP	4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	MAZ	P56270	477 aa	Known RBP	4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	CLDN6	P56747	220 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	RUNX1T1	Q06455	604 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	CDH17	Q12864	832 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	AIMP2	Q13155	320 aa	Known RBP	4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	RPS6KA2	Q15349	733 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	TAF1A	Q15573	450 aa	Predicted RBP	4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	CLPP	Q16740	277 aa	Predicted RBP	4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	ISX	Q2M1V0	245 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	AMZ1	Q400G9	498 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	PYCR3	Q53H96	274 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	NHSL2	Q5HYW2	709 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	AADACL2	Q6P093	401 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	ARHGAP11A	Q6P4F7	1023 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	C4orf22	Q6V702	233 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	RFLNA	Q6ZTI6	216 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	MSANTD1	Q6ZTZ1	278 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	PTCHD4	Q6ZW05	846 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	TRIM73	Q86UV7	250 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	PIM3	Q86V86	326 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	MARCH9	Q86YJ5	346 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	SLC13A5	Q86YT5	568 aa	Predicted RBP	4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	PELI3	Q8N2H9	469 aa		4.49	□□□□□ -1.69
ZNF540-204	ENST00000586792	DCBLD1	Q8N8Z6	715 aa		4.49	□□□□□ -1.69

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