RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 ZCCHC10Q8TBK6 192 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 WDR60Q8WVS4 1066 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 ZPBPQ9BS86 351 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 SLC7A5P2Q9GIP4 190 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 PRDM9Q9NQV7 894 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 ENAMQ9NRM1 1142 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 MS4A12Q9NXJ0 267 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 TAS2R7Q9NYW3 318 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 VAPAQ9P0L0 249 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 SLAMF8Q9P0V8 285 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 ZNF282Q9UDV7 671 aaPredicted RBP16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 ASB4Q9Y574 426 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 PCDHGA3Q9Y5H0 932 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 SPACA6W5XKT8 324 aa16.85■□□□□ 0.29
RBFOX1-222ENST00000585867 SPEGQ15772 3267 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 TRBV5-3A0A0A0MS03 114 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 FITM1A5D6W6 292 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 PRORSD1PA6NEY8 169 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 TRABD2BA6NFA1 517 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 C9orf172C9J069 976 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 ADRB1P08588 477 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 ZCCHC18P0CG32 403 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 BUD31P41223 144 aaPredicted RBP16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 TRIM25Q14258 630 aaKnown RBP16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 FAM214AQ32MH5 1076 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 RUNDC3AQ59EK9 446 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 NDUFAF5Q5TEU4 345 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 DNAJC14Q6Y2X3 702 aaPredicted RBP16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 EFCAB3Q8N7B9 438 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 TNIP2Q8NFZ5 429 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 SLC46A1Q96NT5 459 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 PHF12Q96QT6 1004 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 NDC1Q9BTX1 674 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 NPLQ9BXD5 320 aaPredicted RBP16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 LYRM4Q9HD34 91 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 TEX10Q9NXF1 929 aaPredicted RBP16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 VPS4AQ9UN37 437 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 CORO2BQ9UQ03 480 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 NEUROG3Q9Y4Z2 214 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 PCDHB14Q9Y5E9 798 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 CROCCQ5TZA2 2017 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 SPTBN4Q9H254 2564 aa16.84■□□□□ 0.29
RBFOX1-222ENST00000585867 EVPLLA8MZ36 301 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 PDPK1O15530 556 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 CPSF4O95639 269 aaKnown RBP16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 NTRK1P04629 796 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 ZNF28P17035 718 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 HOXB9P17482 250 aaPredicted RBP16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 TLX1P31314 330 aaPredicted RBP16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 ARSFP54793 590 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 FLOT2Q14254 428 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 RTP5Q14D33 572 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 ZNF385BQ569K4 471 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 GARNL3Q5VVW2 1013 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 RNF148Q8N7C7 305 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 OR4A15Q8NGL6 344 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 GOT1L1Q8NHS2 421 aaPredicted RBP16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 MIEF2Q96C03 454 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 KCTD14Q9BQ13 255 aaPredicted RBP16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 ECSITQ9BQ95 431 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 INPP5KQ9BT40 448 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 THUMPD3Q9BV44 507 aaKnown RBP16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 TRIM15Q9C019 465 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 ALG2Q9H553 416 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 CUTCQ9NTM9 273 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 SLC25A37Q9NYZ2 338 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 PCDHB3Q9Y5E6 796 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 AK5Q9Y6K8 562 aa16.83■□□□□ 0.28
RBFOX1-222ENST00000585867 A0A1W2PRB8 838 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 BCAS2O75934 225 aaPredicted RBP16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 ATP6V1G2O95670 118 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 NR2F6P10588 404 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 TCN1P20061 433 aaPredicted RBP16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 PTPN6P29350 595 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 GCGRP47871 477 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 EMP3P54852 163 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 LIPEQ05469 1076 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 MUM1Q2TAK8 710 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 DEFB134Q4QY38 66 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 RABL3Q5HYI8 236 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 YOD1Q5VVQ6 348 aaPredicted RBP16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 ZNF621Q6ZSS3 439 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 CLECL1Q8IZS7 167 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 AMER3Q8N944 861 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 ZFP28Q8NHY6 868 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 CLIP3Q96DZ5 547 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 ZBED6CLQ96FA7 236 aaPredicted RBP16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 CPPED1Q9BRF8 314 aaPredicted RBP16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 ULBP3Q9BZM4 244 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 B3GNT4Q9C0J1 378 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 ANKHQ9HCJ1 492 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 ACSS1Q9NUB1 689 aaPredicted RBP16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 GIMAP4Q9NUV9 329 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 DHCR7Q9UBM7 475 aaKnown RBP16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 PACSIN3Q9UKS6 424 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 FBXW2Q9UKT8 454 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 PSME2Q9UL46 239 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 SRPK3Q9UPE1 567 aa16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 MRPS2Q9Y399 296 aaKnown RBP16.82■□□□□ 0.28
RBFOX1-222ENST00000585867 MSRB2Q9Y3D2 182 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms