RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 LYRM4Q9HD34 91 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 NECTIN3Q9NQS3 549 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 KCMF1Q9P0J7 381 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 LUZP4Q9P127 313 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 VTI1BQ9UEU0 232 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 TRIM33Q9UPN9 1127 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.09□□□□□ -1.11
ATG4D-202ENST00000585437 RNF11Q9Y3C5 154 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 RAP2CQ9Y3L5 183 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 CNTRLQ7Z7A1 2325 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 PTPN13Q12923 2485 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 HIVEP3Q5T1R4 2406 aa8.09□□□□□ -1.11
ATG4D-202ENST00000585437 EML6Q6ZMW3 1958 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 A0A1B0GTL3 188 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 SYNDIG1LA6NDD5 238 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 TTLL8A6PVC2 850 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 PSMD12O00232 456 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 FOXE1O00358 373 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 RTCAO00442 366 aaKnown RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 MGRN1O60291 552 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 NPHS1O60500 1241 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 B4GALT2O60909 372 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 SMIM24O75264 130 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 CLDN9O95484 217 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 KITP10721 976 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 ESRRAP11474 423 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 PCNAP12004 261 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 HIST1H1TP22492 207 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 ATP5F1P24539 256 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 TNFSF10P50591 281 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 OR4D2P58180 307 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 DNAJB13P59910 316 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 HERVK_113P63132 956 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 ELF3P78545 371 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 IGLV3-21P80748 117 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 TGM3Q08188 693 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 CUL3Q13618 768 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 ZNF169Q14929 603 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 ZRSR2Q15696 482 aaKnown RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 INPP5JQ15735 1006 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 IGFBP7Q16270 282 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 DNAL1Q4LDG9 190 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 DEPDC1Q5TB30 811 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 METTL21CQ5VZV1 264 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 FBXW10Q5XX13 1052 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 RPUSD3Q6P087 351 aaKnown RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 LINC00696Q6ZRV3 163 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 ZNF595Q8IYB9 648 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 ZCCHC7Q8N3Z6 543 aaKnown RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 RNF175Q8N4F7 328 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 ACOT4Q8N9L9 421 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 FAM47BQ8NA70 645 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 APCDD1LQ8NCL9 501 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 GALNT11Q8NCW6 608 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 HAS2Q92819 552 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 REPS1Q96D71 796 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 SNRNP40Q96DI7 357 aaKnown RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 PHF21BQ96EK2 531 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 PTCHD1Q96NR3 888 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 SORT1Q99523 831 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 MTERF1Q99551 399 aaKnown RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 TRMOQ9BU70 441 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 ERVK-6Q9BXR3 956 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 OR51B5Q9H339 312 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 MMADHCQ9H3L0 296 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 NOL11Q9H8H0 719 aaKnown RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 COPS7BQ9H9Q2 264 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 EML4Q9HC35 981 aaKnown RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 SLAMF7Q9NQ25 335 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 PTGFRNQ9P2B2 879 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 MARCOQ9UEW3 520 aaPredicted RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 HAO1Q9UJM8 370 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 MRPS33Q9Y291 106 aaKnown RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 NTNG1Q9Y2I2 539 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 ANGPTL3Q9Y5C1 460 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 LRRK2Q5S007 2527 aa8.08□□□□□ -1.12
ATG4D-202ENST00000585437 UTP20O75691 2785 aaKnown RBP8.08□□□□□ -1.12
ATG4D-202ENST00000585437 A0A0A6YYD5 115 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 BLACEA4D250 179 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 CDK2AP1O14519 115 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 SLC22A2O15244 555 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 HDAC3O15379 428 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 ITM2AO43736 263 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 SEMA3DO95025 777 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 CBX6O95503 412 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 ETHE1O95571 254 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 WDPCPO95876 746 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 TGFB1P01137 390 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 BSGP35613 385 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 SSR2P43308 183 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 GPR143P51810 404 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 CCNG1P51959 295 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 RPS13P62277 151 aaKnown RBP8.07□□□□□ -1.12
ATG4D-202ENST00000585437 KCNC4Q03721 635 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 GALNT1Q10472 559 aaPredicted RBP8.07□□□□□ -1.12
ATG4D-202ENST00000585437 DDX39BQ13838 428 aaKnown RBP8.07□□□□□ -1.12
ATG4D-202ENST00000585437 TLR1Q15399 786 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 INAQ16352 499 aa8.07□□□□□ -1.12
ATG4D-202ENST00000585437 CPSF6Q16630 551 aaKnown RBP eCLIP8.07□□□□□ -1.12
ATG4D-202ENST00000585437 ZNF678Q5SXM1 525 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms