RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 LYARQ9NX58 379 aaKnown RBP23.26■■□□□ 1.31
TSEN54-209ENST00000583454 VPS29Q9UBQ0 182 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 PHF11Q9UIL8 331 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 FBXW2Q9UKT8 454 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 ATG4BQ9Y4P1 393 aa23.26■■□□□ 1.31
TSEN54-209ENST00000583454 TGFBR3LH3BV60 316 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 TM9SF1O15321 606 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 PROM1O43490 865 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 TMPRSS11DO60235 418 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 SEC24DO94855 1032 aaPredicted RBP23.25■■□□□ 1.31
TSEN54-209ENST00000583454 PRR35P0CG20 571 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 H2AFXP16104 143 aaPredicted RBP23.25■■□□□ 1.31
TSEN54-209ENST00000583454 CPN2P22792 545 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 HNRNPH2P55795 449 aaKnown RBP23.25■■□□□ 1.31
TSEN54-209ENST00000583454 ACTN3Q08043 901 aaPredicted RBP23.25■■□□□ 1.31
TSEN54-209ENST00000583454 B3GNTL1Q67FW5 361 aaPredicted RBP23.25■■□□□ 1.31
TSEN54-209ENST00000583454 PLAG1Q6DJT9 500 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 ISLR2Q6UXK2 745 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 RIPOR1Q6ZS17 1223 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 C5orf34Q96MH7 638 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 TMBIM4Q9HC24 238 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 AGPAT4Q9NRZ5 378 aa23.25■■□□□ 1.31
TSEN54-209ENST00000583454 CREBBPQ92793 2442 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 FAM58BPP0C7Q3 252 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 DHRS4L1P0CG22 281 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 CHN1P15882 459 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 TPP2P29144 1249 aaPredicted RBP23.24■■□□□ 1.31
TSEN54-209ENST00000583454 SOX11P35716 441 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 SERPINB4P48594 390 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 GALNT1Q10472 559 aaPredicted RBP23.24■■□□□ 1.31
TSEN54-209ENST00000583454 SLC13A2Q13183 592 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 IRAK1BP1Q5VVH5 260 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 ZNF787Q6DD87 383 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 PAPD4Q6PIY7 484 aaKnown RBP23.24■■□□□ 1.31
TSEN54-209ENST00000583454 CYP20A1Q6UW02 462 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 LINC00696Q6ZRV3 163 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 PAGE2Q7Z2X7 111 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 AMER2Q8N7J2 671 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 LMF1Q96S06 567 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 LPAR4Q99677 370 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 ACPTQ9BZG2 426 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 EPS8L2Q9H6S3 715 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 APCP25054 2843 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 CSMD1Q96PZ7 3565 aa23.24■■□□□ 1.31
TSEN54-209ENST00000583454 KLK1P06870 262 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 CELA2AP08217 269 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 UROSP10746 265 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 SERPINB5P36952 375 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 AP2B1P63010 937 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 TLR1Q15399 786 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 COMMD6Q7Z4G1 85 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 CATSPER1Q8NEC5 780 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 CHTF18Q8WVB6 975 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 SREK1Q8WXA9 508 aaKnown RBP23.23■■□□□ 1.31
TSEN54-209ENST00000583454 TLCD1Q96CP7 247 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 SHCBP1LQ9BZQ2 653 aa23.23■■□□□ 1.31
TSEN54-209ENST00000583454 A0A1W2PR48 441 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 SYNDIG1LA6NDD5 238 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 GOLGA6L10A6NI86 522 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 BIRC5O15392 142 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 ZWINTO95229 277 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 GBAP04062 536 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 SERPINB3P29508 390 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 DCTP40126 519 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 TNFRSF17Q02223 184 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 ELOAQ14241 798 aaKnown RBP23.22■■□□□ 1.31
TSEN54-209ENST00000583454 EXT1Q16394 746 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 ARL13AQ5H913 290 aaPredicted RBP23.22■■□□□ 1.31
TSEN54-209ENST00000583454 C18orf63Q68DL7 685 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 ZCCHC23Q6ZST2 131 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 TRIM46Q7Z4K8 759 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 NUDCD3Q8IVD9 361 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 M1APQ8TC57 530 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 FAR1Q8WVX9 515 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 TANKQ92844 425 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 ANKRD9Q96BM1 317 aaPredicted RBP23.22■■□□□ 1.31
TSEN54-209ENST00000583454 SLX1AQ9BQ83 275 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 RPF2Q9H7B2 306 aaKnown RBP23.22■■□□□ 1.31
TSEN54-209ENST00000583454 KCNK9Q9NPC2 374 aa23.22■■□□□ 1.31
TSEN54-209ENST00000583454 ARGLU1Q9NWB6 273 aaPredicted RBP23.22■■□□□ 1.31
TSEN54-209ENST00000583454 AZIN1O14977 448 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 CRCPO75575 148 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 CHRNGP07510 517 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 FGF4P08620 206 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 ITGAMP11215 1152 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 TLX1P31314 330 aaPredicted RBP23.21■■□□□ 1.31
TSEN54-209ENST00000583454 TERF2Q15554 542 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 BTBD16Q32M84 506 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 CCNYL2Q5T2Q4 361 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 RPUSD3Q6P087 351 aaKnown RBP23.21■■□□□ 1.31
TSEN54-209ENST00000583454 SCIMPQ6UWF3 145 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 CLNKQ7Z7G1 428 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 C1orf52Q8N6N3 182 aaKnown RBP23.21■■□□□ 1.31
TSEN54-209ENST00000583454 NFAM1Q8NET5 270 aaPredicted RBP23.21■■□□□ 1.31
TSEN54-209ENST00000583454 MMP25Q9NPA2 562 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 VTI1BQ9UEU0 232 aa23.21■■□□□ 1.31
TSEN54-209ENST00000583454 SAGE2PA6NJ88 616 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 EDN3P14138 238 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 ARRB2P32121 409 aa23.2■■□□□ 1.3
TSEN54-209ENST00000583454 BUD31P41223 144 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms