RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 NR0B1P51843 470 aaKnown RBP18.98■□□□□ 0.63
SHMT1-209ENST00000582653 NEK2P51955 445 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 RAP1GDS1P52306 607 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 HK2P52789 917 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 RNF4P78317 190 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 GTF2H2Q13888 395 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 PCBP2Q15366 365 aaKnown RBP eCLIP18.98■□□□□ 0.63
SHMT1-209ENST00000582653 CPSF6Q16630 551 aaKnown RBP eCLIP18.98■□□□□ 0.63
SHMT1-209ENST00000582653 GTF2H2CQ6P1K8 395 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 KLC3Q6P597 504 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 DGAT2L6Q6ZPD8 337 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 MMGT1Q8N4V1 131 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 PSD4Q8NDX1 1056 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 OR8K3Q8NH51 312 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 DOK4Q8TEW6 326 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 LURAP1Q96LR2 239 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 SPOCK3Q9BQ16 436 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 HPF1Q9NWY4 346 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 COQ3Q9NZJ6 369 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 MTRF1LQ9UGC7 380 aaKnown RBP18.98■□□□□ 0.63
SHMT1-209ENST00000582653 PPT2Q9UMR5 302 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 ATG4BQ9Y4P1 393 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 PCDHGA11Q9Y5H2 935 aa18.98■□□□□ 0.63
SHMT1-209ENST00000582653 PINLYPA6NC86 204 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 CDC40O60508 579 aaKnown RBP eCLIP18.97■□□□□ 0.63
SHMT1-209ENST00000582653 TPOP07202 933 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 PIK3CGP48736 1102 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 HNRNPH2P55795 449 aaKnown RBP18.97■□□□□ 0.63
SHMT1-209ENST00000582653 ZNF750Q32MQ0 723 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 TECRLQ5HYJ1 363 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 TMEM211Q6ICI0 200 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 ARHGAP11AQ6P4F7 1023 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 PAOXQ6QHF9 649 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 GPR180Q86V85 440 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 RELL1Q8IUW5 271 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 OR52N2Q8NGI0 321 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 UHMK1Q8TAS1 419 aaKnown RBP18.97■□□□□ 0.63
SHMT1-209ENST00000582653 ZNF721Q8TF20 911 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 CA5BP1Q8WTZ4 195 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 SLC44A1Q8WWI5 657 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 CDK15Q96Q40 435 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 ENKD1Q9H0I2 346 aa18.97■□□□□ 0.63
SHMT1-209ENST00000582653 RPF2Q9H7B2 306 aaKnown RBP18.97■□□□□ 0.63
SHMT1-209ENST00000582653 CCDC189A1A4V9 331 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 G3V3Y1 287 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 H0YIV9 168 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 HRKO00198 91 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 OR7A17O14581 309 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 EEDO75530 441 aaKnown RBP18.96■□□□□ 0.63
SHMT1-209ENST00000582653 PDE9AO76083 593 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 PTX3P26022 381 aaPredicted RBP18.96■□□□□ 0.63
SHMT1-209ENST00000582653 IGLV3-21P80748 117 aaPredicted RBP18.96■□□□□ 0.63
SHMT1-209ENST00000582653 FOLH1Q04609 750 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 RGS9BPQ6ZS82 235 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 PTGR2Q8N8N7 351 aaPredicted RBP18.96■□□□□ 0.63
SHMT1-209ENST00000582653 ACBD4Q8NC06 268 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 OR5L2Q8NGL0 311 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 UCN3Q969E3 161 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 SDCCAG3Q96C92 435 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 PHF21BQ96EK2 531 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 DGAT2Q96PD7 388 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 ZNF717Q9BY31 904 aaPredicted RBP18.96■□□□□ 0.63
SHMT1-209ENST00000582653 FUT8Q9BYC5 575 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 DEFB127Q9H1M4 99 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 NOL11Q9H8H0 719 aaKnown RBP18.96■□□□□ 0.63
SHMT1-209ENST00000582653 TSC22D4Q9Y3Q8 395 aa18.96■□□□□ 0.63
SHMT1-209ENST00000582653 TNPO3Q9Y5L0 923 aaKnown RBP18.96■□□□□ 0.63
SHMT1-209ENST00000582653 DCHS2Q6V1P9 2916 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 A0A0G2JMM0 328 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 A0A1W2PPB8 328 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 A0A1W2PRS3 328 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 KIR3DP1A8MWS1 328 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 TMPRSS11DO60235 418 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 INHBAP08476 426 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 CNR1P21554 472 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 ECHS1P30084 290 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 SSTR2P30874 369 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 BSGP35613 385 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 STT3AP46977 705 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 TNFRSF17Q02223 184 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 BIKQ13323 160 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 CD163Q86VB7 1156 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 ZCCHC7Q8N3Z6 543 aaKnown RBP18.95■□□□□ 0.62
SHMT1-209ENST00000582653 L3MBTL4Q8NA19 623 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 OR2M7Q8NG81 312 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 WDR20Q8TBZ3 569 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 SENP5Q96HI0 755 aaPredicted RBP18.95■□□□□ 0.62
SHMT1-209ENST00000582653 SCYL1Q96KG9 808 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 PAFAH2Q99487 392 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 CENPKQ9BS16 269 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 MS4A12Q9NXJ0 267 aa18.95■□□□□ 0.62
SHMT1-209ENST00000582653 GLOD5A6NK44 160 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 POC1B-GALNT4F8VUJ3 575 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 PROM1O43490 865 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 UGDHO60701 494 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 GBAP04062 536 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 COX7A2P14406 83 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 POU3F2P20265 443 aaPredicted RBP18.94■□□□□ 0.62
SHMT1-209ENST00000582653 ARL1P40616 181 aaPredicted RBP18.94■□□□□ 0.62
SHMT1-209ENST00000582653 MAGEA12P43365 314 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms