RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 KLF15Q9UIH9 416 aa8.81□□□□□ -1
SS18-220ENST00000582092 UTS2RQ9UKP6 389 aa8.81□□□□□ -1
SS18-220ENST00000582092 ANGPT4Q9Y264 503 aa8.81□□□□□ -1
SS18-220ENST00000582092 BTBD3Q9Y2F9 522 aa8.81□□□□□ -1
SS18-220ENST00000582092 MAP4K5Q9Y4K4 846 aa8.81□□□□□ -1
SS18-220ENST00000582092 TPRP12270 2363 aaKnown RBP8.8□□□□□ -1
SS18-220ENST00000582092 COL5A1P20908 1838 aaPredicted RBP8.8□□□□□ -1
SS18-220ENST00000582092 CROCCQ5TZA2 2017 aa8.8□□□□□ -1
SS18-220ENST00000582092 A0A0A6YYD5 115 aa8.8□□□□□ -1
SS18-220ENST00000582092 SPAARA0A1B0GVQ0 90 aa8.8□□□□□ -1
SS18-220ENST00000582092 A0A1W2PR77 199 aa8.8□□□□□ -1
SS18-220ENST00000582092 OR2A25A4D2G3 310 aa8.8□□□□□ -1
SS18-220ENST00000582092 FAM149AA5PLN7 773 aa8.8□□□□□ -1
SS18-220ENST00000582092 OR5K3A6NET4 321 aa8.8□□□□□ -1
SS18-220ENST00000582092 YY2O15391 372 aa8.8□□□□□ -1
SS18-220ENST00000582092 SCN2BO60939 215 aa8.8□□□□□ -1
SS18-220ENST00000582092 BMP10O95393 424 aa8.8□□□□□ -1
SS18-220ENST00000582092 B3GALT4O96024 378 aa8.8□□□□□ -1
SS18-220ENST00000582092 PROS1P07225 676 aa8.8□□□□□ -1
SS18-220ENST00000582092 ALPPL2P10696 532 aa8.8□□□□□ -1
SS18-220ENST00000582092 KDELR2P33947 212 aa8.8□□□□□ -1
SS18-220ENST00000582092 PCGF2P35227 344 aa8.8□□□□□ -1
SS18-220ENST00000582092 CCT3P49368 545 aaKnown RBP8.8□□□□□ -1
SS18-220ENST00000582092 ARL4DP49703 201 aa8.8□□□□□ -1
SS18-220ENST00000582092 NCBP2P52298 156 aaKnown RBP eCLIP8.8□□□□□ -1
SS18-220ENST00000582092 DSTNP60981 165 aa8.8□□□□□ -1
SS18-220ENST00000582092 BNC1Q01954 994 aa8.8□□□□□ -1
SS18-220ENST00000582092 RELAQ04206 551 aa8.8□□□□□ -1
SS18-220ENST00000582092 FXNQ16595 210 aa8.8□□□□□ -1
SS18-220ENST00000582092 NDUFA9Q16795 377 aa8.8□□□□□ -1
SS18-220ENST00000582092 ZNF630Q2M218 657 aaPredicted RBP8.8□□□□□ -1
SS18-220ENST00000582092 KRT80Q6KB66 452 aa8.8□□□□□ -1
SS18-220ENST00000582092 FBXO42Q6P3S6 717 aa8.8□□□□□ -1
SS18-220ENST00000582092 UBE3DQ7Z6J8 389 aa8.8□□□□□ -1
SS18-220ENST00000582092 ZDHHC13Q8IUH4 622 aa8.8□□□□□ -1
SS18-220ENST00000582092 ZZZ3Q8IYH5 903 aa8.8□□□□□ -1
SS18-220ENST00000582092 CLEC4FQ8N1N0 589 aa8.8□□□□□ -1
SS18-220ENST00000582092 SVOPLQ8N434 492 aa8.8□□□□□ -1
SS18-220ENST00000582092 ARL14Q8N4G2 192 aa8.8□□□□□ -1
SS18-220ENST00000582092 ZCCHC10Q8TBK6 192 aa8.8□□□□□ -1
SS18-220ENST00000582092 MOAP1Q96BY2 351 aa8.8□□□□□ -1
SS18-220ENST00000582092 ZNF764Q96H86 408 aaPredicted RBP8.8□□□□□ -1
SS18-220ENST00000582092 SERINC2Q96SA4 455 aa8.8□□□□□ -1
SS18-220ENST00000582092 LRRC61Q9BV99 259 aa8.8□□□□□ -1
SS18-220ENST00000582092 SEMA6CQ9H3T2 930 aa8.8□□□□□ -1
SS18-220ENST00000582092 IKZF5Q9H5V7 419 aa8.8□□□□□ -1
SS18-220ENST00000582092 RUBCNLQ9H714 662 aa8.8□□□□□ -1
SS18-220ENST00000582092 IL21RQ9HBE5 538 aa8.8□□□□□ -1
SS18-220ENST00000582092 C3orf14Q9HBI5 128 aa8.8□□□□□ -1
SS18-220ENST00000582092 SLC35C2Q9NQQ7 365 aa8.8□□□□□ -1
SS18-220ENST00000582092 SLC6A13Q9NSD5 602 aa8.8□□□□□ -1
SS18-220ENST00000582092 OLAHQ9NV23 265 aa8.8□□□□□ -1
SS18-220ENST00000582092 TRPC4Q9UBN4 977 aa8.8□□□□□ -1
SS18-220ENST00000582092 PNMA8BQ9ULN7 279 aaPredicted RBP8.8□□□□□ -1
SS18-220ENST00000582092 AP4B1Q9Y6B7 739 aa8.8□□□□□ -1
SS18-220ENST00000582092 DCHS1Q96JQ0 3298 aa8.8□□□□□ -1
SS18-220ENST00000582092 DMDP11532 3685 aa8.79□□□□□ -1
SS18-220ENST00000582092 PTPRBP23467 1997 aa8.79□□□□□ -1
SS18-220ENST00000582092 ARID1BQ8NFD5 2236 aaPredicted RBP8.79□□□□□ -1
SS18-220ENST00000582092 MYO1GB0I1T2 1018 aa8.79□□□□□ -1
SS18-220ENST00000582092 C10orf142B7Z368 130 aa8.79□□□□□ -1
SS18-220ENST00000582092 LMO7DNF2Z398 122 aa8.79□□□□□ -1
SS18-220ENST00000582092 G3V2T6 193 aa8.79□□□□□ -1
SS18-220ENST00000582092 H0YGG7 62 aa8.79□□□□□ -1
SS18-220ENST00000582092 DENRO43583 198 aaKnown RBP8.79□□□□□ -1
SS18-220ENST00000582092 TMPRSS11DO60235 418 aa8.79□□□□□ -1
SS18-220ENST00000582092 PDE9AO76083 593 aa8.79□□□□□ -1
SS18-220ENST00000582092 LDOC1O95751 146 aaPredicted RBP8.79□□□□□ -1
SS18-220ENST00000582092 WNT1P04628 370 aa8.79□□□□□ -1
SS18-220ENST00000582092 FABP3P05413 133 aa8.79□□□□□ -1
SS18-220ENST00000582092 CELA2BP08218 269 aaPredicted RBP8.79□□□□□ -1
SS18-220ENST00000582092 FTH1P19P0C7X4 201 aa8.79□□□□□ -1
SS18-220ENST00000582092 NR2F6P10588 404 aa8.79□□□□□ -1
SS18-220ENST00000582092 IL1RNP18510 177 aa8.79□□□□□ -1
SS18-220ENST00000582092 CERS1P27544 350 aa8.79□□□□□ -1
SS18-220ENST00000582092 PTPN6P29350 595 aa8.79□□□□□ -1
SS18-220ENST00000582092 PPP2R1BP30154 601 aa8.79□□□□□ -1
SS18-220ENST00000582092 GZMMP51124 257 aa8.79□□□□□ -1
SS18-220ENST00000582092 TPD52P55327 224 aaPredicted RBP8.79□□□□□ -1
SS18-220ENST00000582092 MAZP56270 477 aaKnown RBP8.79□□□□□ -1
SS18-220ENST00000582092 ARF3P61204 181 aaPredicted RBP8.79□□□□□ -1
SS18-220ENST00000582092 SCARB2Q14108 478 aa8.79□□□□□ -1
SS18-220ENST00000582092 MYBPC3Q14896 1274 aa8.79□□□□□ -1
SS18-220ENST00000582092 PDK3Q15120 406 aa8.79□□□□□ -1
SS18-220ENST00000582092 ADPRMQ3LIE5 342 aa8.79□□□□□ -1
SS18-220ENST00000582092 PPP4R4Q6NUP7 873 aa8.79□□□□□ -1
SS18-220ENST00000582092 ENPP6Q6UWR7 440 aa8.79□□□□□ -1
SS18-220ENST00000582092 EIF3MQ7L2H7 374 aaKnown RBP8.79□□□□□ -1
SS18-220ENST00000582092 C6orf120Q7Z4R8 191 aa8.79□□□□□ -1
SS18-220ENST00000582092 PATL1Q86TB9 770 aaKnown RBP8.79□□□□□ -1
SS18-220ENST00000582092 STK32CQ86UX6 486 aa8.79□□□□□ -1
SS18-220ENST00000582092 ZNF761Q86XN6 746 aaPredicted RBP8.79□□□□□ -1
SS18-220ENST00000582092 RNF130Q86XS8 419 aa8.79□□□□□ -1
SS18-220ENST00000582092 ZDHHC21Q8IVQ6 265 aa8.79□□□□□ -1
SS18-220ENST00000582092 KBTBD2Q8IY47 623 aa8.79□□□□□ -1
SS18-220ENST00000582092 GALNT15Q8N3T1 639 aa8.79□□□□□ -1
SS18-220ENST00000582092 CBR4Q8N4T8 237 aa8.79□□□□□ -1
SS18-220ENST00000582092 OR5AK3PQ8NH89 298 aa8.79□□□□□ -1
SS18-220ENST00000582092 BAHD1Q8TBE0 780 aaPredicted RBP8.79□□□□□ -1
SS18-220ENST00000582092 ZDHHC12Q96GR4 267 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms