RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 GATAD1Q8WUU5 269 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 CASP10Q92851 521 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 ZNF396Q96N95 335 aaPredicted RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 SPATA13Q96N96 652 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 FAM111AQ96PZ2 611 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 RAB3IPQ96QF0 476 aaPredicted RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 PLEKHF1Q96S99 279 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 EGFL8Q99944 293 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 CACNG6Q9BXT2 260 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 NYXQ9GZU5 481 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 NT5C3AQ9H0P0 336 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 PNNQ9H307 717 aaKnown RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 NCOR1P1Q9H4R4 102 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 TM9SF3Q9HD45 589 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 PFDN4Q9NQP4 134 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 SLC35D1Q9NTN3 355 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 SOHLH2Q9NX45 425 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 MIS18AQ9NYP9 233 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 ASB3Q9Y575 518 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 TRBV5-5A0A0J9YX44 114 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 A0A1B0GU03 582 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 C15orf61A6NNL5 157 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 KIF2AO00139 706 aaPredicted RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 MAGEB3O15480 346 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 TEX28O15482 410 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 PRDM1O75626 825 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 LUC7L3O95232 432 aaKnown RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 TRIM16O95361 564 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 PRAMEF12O95522 483 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 VTNP04004 478 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 SERPING1P05155 500 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 NCF1P14598 390 aaPredicted RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 RPL35AP18077 110 aaKnown RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 CYP2A7P20853 494 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 MAGEA4P43358 317 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 KCNJ1P48048 391 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 PRELPP51888 382 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 GUCY2DQ02846 1103 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 ELP6Q0PNE2 266 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 CETN1Q12798 172 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 MEP1BQ16820 701 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 LYSMD4Q5XG99 296 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 ANGPTL8Q6UXH0 198 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 Q6ZRP5 223 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 C11orf57Q6ZUT1 292 aaPredicted RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 ARMCX2Q7L311 632 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 HDDC3Q8N4P3 179 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 RTL3Q8N8U3 475 aaKnown RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 CNNM3Q8NE01 707 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 OR56B2PQ8NGI1 322 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 MAPK15Q8TD08 544 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 FAM162AQ96A26 154 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 RAB7BQ96AH8 199 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 PYCR2Q96C36 320 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 PGM2Q96G03 612 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 CFAP36Q96G28 342 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 USP28Q96RU2 1077 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 INTS14Q96SY0 518 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 SYT11Q9BT88 431 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 THUMPD2Q9BTF0 503 aaKnown RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 UTP14AQ9BVJ6 771 aaKnown RBP3.79□□□□□ -1.8
NF1-220ENST00000581113 PALMDQ9NP74 551 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 NMRK1Q9NWW6 199 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 CNIH4Q9P003 139 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 IL19Q9UHD0 177 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 APPL1Q9UKG1 709 aa3.79□□□□□ -1.8
NF1-220ENST00000581113 NIP7Q9Y221 180 aaKnown RBP eCLIP3.79□□□□□ -1.8
NF1-220ENST00000581113 TTC41PQ6P2S7 1318 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 WDR19Q8NEZ3 1342 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 MAPK8IP3Q9UPT6 1336 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 NRXN2Q9P2S2 1712 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 SNED1Q8TER0 1413 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 SIPA1L3O60292 1781 aaPredicted RBP3.78□□□□□ -1.8
NF1-220ENST00000581113 A0A1W2PPW3 197 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 CTAGE15A4D2H0 777 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 GLTPD2A6NH11 291 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 NEMFO60524 1076 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 DIRAS3O95661 229 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 BAG3O95817 575 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 STAG3L1P0CL83 205 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 TCF4P15884 667 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 SOX6P35712 828 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 CETN2P41208 172 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 XGP55808 180 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 CSNK2BP67870 215 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 SNX1Q13596 522 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 MXD4Q14582 209 aaPredicted RBP3.78□□□□□ -1.8
NF1-220ENST00000581113 EFTUD2Q15029 972 aaKnown RBP eCLIP3.78□□□□□ -1.8
NF1-220ENST00000581113 CCDC40Q4G0X9 1142 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 LRRC73Q5JTD7 316 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 FBXL22Q6P050 247 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 LEKR1Q6ZMV7 388 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 STXBP4Q6ZWJ1 553 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 CTAGE6Q86UF2 777 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 HOOK3Q86VS8 718 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 AMIGO1Q86WK6 493 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 CCDC63Q8NA47 563 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 ZNF519Q8TB69 540 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 ZNRF4Q8WWF5 429 aa3.78□□□□□ -1.8
NF1-220ENST00000581113 PIK3R3Q92569 461 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms