RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 POLR3GO15318 223 aaPredicted RBP9.28□□□□□ -0.92
GGA3-209ENST00000580646 PROM1O43490 865 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 TMPRSS11DO60235 418 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 DNAJB6O75190 326 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 ALOX12BO75342 701 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 SH3BGRLO75368 114 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 EEDO75530 441 aaKnown RBP9.28□□□□□ -0.92
GGA3-209ENST00000580646 LYPLA1O75608 230 aaPredicted RBP9.28□□□□□ -0.92
GGA3-209ENST00000580646 FAM58BPP0C7Q3 252 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 C8orf89P0DMQ9 161 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 SERPINB3P29508 390 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 PPP2R1BP30154 601 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 TLX1P31314 330 aaPredicted RBP9.28□□□□□ -0.92
GGA3-209ENST00000580646 TIA1P31483 386 aaKnown RBP eCLIP9.28□□□□□ -0.92
GGA3-209ENST00000580646 MNAT1P51948 309 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 HMGCS1Q01581 520 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 TNFRSF17Q02223 184 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 ACSM2AQ08AH3 577 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 KIAA0040Q15053 153 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 CCNYL2Q5T2Q4 361 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 VWA5B1Q5TIE3 1220 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 ACSM2BQ68CK6 577 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 JMJD6Q6NYC1 403 aaPredicted RBP9.28□□□□□ -0.92
GGA3-209ENST00000580646 KIRREL2Q6UWL6 708 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 Q6ZSR9 355 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 LAPTM4BQ86VI4 370 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 SCUBE1Q8IWY4 988 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 C1orf52Q8N6N3 182 aaKnown RBP9.28□□□□□ -0.92
GGA3-209ENST00000580646 RBMXL3Q8N7X1 1067 aaKnown RBP9.28□□□□□ -0.92
GGA3-209ENST00000580646 LRRC8CQ8TDW0 803 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 DYDC1Q8WWB3 177 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 CKAP2Q8WWK9 683 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 METTL21AQ8WXB1 218 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 TANKQ92844 425 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 PPP3R2Q96LZ3 170 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 MAGEB18Q96M61 343 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 C7orf26Q96N11 449 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 HBEGFQ99075 208 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 MAPKAP1Q9BPZ7 522 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 SORBS1Q9BX66 1292 aaKnown RBP9.28□□□□□ -0.92
GGA3-209ENST00000580646 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 ZNF552Q9H707 407 aaPredicted RBP9.28□□□□□ -0.92
GGA3-209ENST00000580646 RIC8BQ9NVN3 520 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 C1orf109Q9NX04 203 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 VTI1BQ9UEU0 232 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 FBXL4Q9UKA2 621 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 MKL2Q9ULH7 1088 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 CPAMD8Q8IZJ3 1885 aa9.28□□□□□ -0.92
GGA3-209ENST00000580646 TCRBV16S1A1N1A0A5B0 115 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 TMEM233B4DJY2 109 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 PIP5K1BO14986 540 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 LSM1O15116 133 aaKnown RBP9.27□□□□□ -0.93
GGA3-209ENST00000580646 PCDH7O60245 1069 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 PRMT3O60678 531 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 CTNSO60931 367 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 VPS4BO75351 444 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 MYO1DO94832 1006 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 SORBS2O94875 1100 aaKnown RBP9.27□□□□□ -0.93
GGA3-209ENST00000580646 ALPPP05187 535 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 KLK1P06870 262 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 PCSK2P16519 638 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 CPN2P22792 545 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 ITGA3P26006 1051 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 CD97P48960 835 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 EFNA3P52797 238 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 MAPK12P53778 367 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 RAE1P78406 368 aaKnown RBP9.27□□□□□ -0.93
GGA3-209ENST00000580646 IGLV3-21P80748 117 aaPredicted RBP9.27□□□□□ -0.93
GGA3-209ENST00000580646 AIMP2Q13155 320 aaKnown RBP9.27□□□□□ -0.93
GGA3-209ENST00000580646 SERTAD2Q14140 314 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 MINDY4Q4G0A6 757 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 SLC6A19Q695T7 634 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 IKBIPQ70UQ0 350 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 ATCAYQ86WG3 371 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 PARP9Q8IXQ6 854 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 PRSS58Q8IYP2 241 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 EFCAB3Q8N7B9 438 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 PIWIL2Q8TC59 973 aaKnown RBP9.27□□□□□ -0.93
GGA3-209ENST00000580646 CPT1CQ8TCG5 803 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 C19orf60Q96EN9 201 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 APIPQ96GX9 242 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 CSF3RQ99062 836 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 WDR41Q9HAD4 459 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 LRTM1Q9HBL6 345 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 SLAMF7Q9NQ25 335 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 PRTFDC1Q9NRG1 225 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 FIS1Q9Y3D6 152 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 ATG4BQ9Y4P1 393 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 CLDN16Q9Y5I7 305 aa9.27□□□□□ -0.93
GGA3-209ENST00000580646 UBR5O95071 2799 aaPredicted RBP9.26□□□□□ -0.93
GGA3-209ENST00000580646 IGHV1-45A0A0A0MS14 117 aa9.26□□□□□ -0.93
GGA3-209ENST00000580646 A0A1W2PR48 441 aa9.26□□□□□ -0.93
GGA3-209ENST00000580646 C1orf226A1L170 272 aa9.26□□□□□ -0.93
GGA3-209ENST00000580646 TRPC5OSA6NMA1 111 aa9.26□□□□□ -0.93
GGA3-209ENST00000580646 HDAC3O15379 428 aa9.26□□□□□ -0.93
GGA3-209ENST00000580646 B4GALT2O60909 372 aa9.26□□□□□ -0.93
GGA3-209ENST00000580646 SEC22BO75396 215 aa9.26□□□□□ -0.93
GGA3-209ENST00000580646 JRKO75564 520 aa9.26□□□□□ -0.93
GGA3-209ENST00000580646 HPP00738 406 aa9.26□□□□□ -0.93
GGA3-209ENST00000580646 LINC00032P0C843 101 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms