RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SCN2AQ99250 2005 aa13.44□□□□□ -0.26
SKA2-205ENST00000580541 FER1L5A0AVI2 2057 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 GABRR3A8MPY1 467 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 IDSB3KWA1 339 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 SCAMP2O15127 329 aaKnown RBP13.43□□□□□ -0.26
SKA2-205ENST00000580541 PGRMC2O15173 223 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 LRATO95237 230 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 FURINP09958 794 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 C8orf89P0DMQ9 161 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 NTSP30990 170 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 XKP51811 444 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 SF3A3Q12874 501 aaKnown RBP eCLIP13.43□□□□□ -0.26
SKA2-205ENST00000580541 ERV3-1Q14264 604 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 C6orf163Q5TEZ5 329 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 ANXA8L1Q5VT79 327 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 TMEM198Q66K66 360 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 CLNKQ7Z7G1 428 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 RAB43Q86YS6 212 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 TICAM1Q8IUC6 712 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 CPSF7Q8N684 471 aaKnown RBP13.43□□□□□ -0.26
SKA2-205ENST00000580541 ZSCAN1Q8NBB4 408 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 CLHC1Q8NHS4 586 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 ZFP28Q8NHY6 868 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 GFM2Q969S9 779 aaKnown RBP13.43□□□□□ -0.26
SKA2-205ENST00000580541 KLHL29Q96CT2 875 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 BBS4Q96RK4 519 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 ALOXE3Q9BYJ1 711 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 BHLHE41Q9C0J9 482 aaPredicted RBP13.43□□□□□ -0.26
SKA2-205ENST00000580541 SOX17Q9H6I2 414 aaPredicted RBP13.43□□□□□ -0.26
SKA2-205ENST00000580541 SLC35C2Q9NQQ7 365 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 LANCL2Q9NS86 450 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 PCDHGB4Q9UN71 923 aa13.43□□□□□ -0.26
SKA2-205ENST00000580541 DCHS1Q96JQ0 3298 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 LOC101059948A0A1B0GTJ6 334 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 FAM234BA2RU67 622 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 GLOD5A6NK44 160 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 OR10H2O60403 315 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 ALOX12BO75342 701 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 ERAL1O75616 437 aaKnown RBP13.42□□□□□ -0.26
SKA2-205ENST00000580541 CDC123O75794 336 aaPredicted RBP13.42□□□□□ -0.26
SKA2-205ENST00000580541 KLF7O75840 302 aaPredicted RBP13.42□□□□□ -0.26
SKA2-205ENST00000580541 SLC35E2P0CK97 266 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 PORP16435 677 aaPredicted RBP13.42□□□□□ -0.26
SKA2-205ENST00000580541 S100A3P33764 101 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 GALNSP34059 522 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 KIR3DL1P43629 444 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 KCNK10P57789 538 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 UFM1P61960 85 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 RHAGQ02094 409 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 FOLH1Q04609 750 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 COL9A2Q14055 689 aaPredicted RBP13.42□□□□□ -0.26
SKA2-205ENST00000580541 MAPRE2Q15555 327 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 PGS1Q32NB8 556 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 LRRC69Q6ZNQ3 347 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 CAMKMTQ7Z624 323 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 SCUBE1Q8IWY4 988 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 RIMKLAQ8IXN7 391 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 PRSS58Q8IYP2 241 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 OR8J2Q8NGG1 315 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 TSPEARQ8WU66 669 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 COQ8BQ96D53 544 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 ZBED6CLQ96FA7 236 aaPredicted RBP13.42□□□□□ -0.26
SKA2-205ENST00000580541 DGAT2Q96PD7 388 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 LRRC37BQ96QE4 947 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 CSF3RQ99062 836 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 SPSB2Q99619 263 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 VN1R1Q9GZP7 353 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 CLMPQ9H6B4 373 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 RMND5AQ9H871 391 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 CES1P1Q9UKY3 287 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 COPG1Q9Y678 874 aaKnown RBP13.42□□□□□ -0.26
SKA2-205ENST00000580541 CCDC88CQ9P219 2028 aa13.42□□□□□ -0.26
SKA2-205ENST00000580541 PEX12O00623 359 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 LDB3O75112 727 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 JRKO75564 520 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 CREG1O75629 220 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 SLITRK5O94991 958 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 IFNA16P05015 189 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 TNNI3P19429 210 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 GPX3P22352 226 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 MMP11P24347 488 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 POLR2JP52435 117 aaKnown RBP13.41□□□□□ -0.26
SKA2-205ENST00000580541 MANFP55145 182 aaKnown RBP13.41□□□□□ -0.26
SKA2-205ENST00000580541 NME5P56597 212 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 BTG2P78543 158 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 PLIN5Q00G26 463 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 FOXK2Q01167 660 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 PDE7AQ13946 482 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 AGKQ53H12 422 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 BROXQ5VW32 411 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 MTDHQ86UE4 582 aaKnown RBP13.41□□□□□ -0.26
SKA2-205ENST00000580541 LAPTM4BQ86VI4 370 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 ST13P4Q8IZP2 240 aaPredicted RBP13.41□□□□□ -0.26
SKA2-205ENST00000580541 LRRC25Q8N386 305 aaPredicted RBP13.41□□□□□ -0.26
SKA2-205ENST00000580541 DAZLQ92904 295 aaKnown RBP13.41□□□□□ -0.26
SKA2-205ENST00000580541 EXOSC8Q96B26 276 aaKnown RBP13.41□□□□□ -0.26
SKA2-205ENST00000580541 ANKRD9Q96BM1 317 aaPredicted RBP13.41□□□□□ -0.26
SKA2-205ENST00000580541 MARK4Q96L34 752 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 DUSP26Q9BV47 211 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 RBCK1Q9BYM8 510 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms