RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 OCA2Q04671 838 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 MAP7Q14244 749 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 MLC1Q15049 377 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 SYT16Q17RD7 645 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 IGF2-ASQ6U949 168 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 HACD2Q6Y1H2 254 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 NUDT8Q8WV74 236 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 ROPN1LQ96C74 230 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 RCN3Q96D15 328 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 CCDC115Q96NT0 180 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 SLC26A1Q9H2B4 701 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 PRTFDC1Q9NRG1 225 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 SLC22A11Q9NSA0 550 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 GID8Q9NWU2 228 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 IFT80Q9P2H3 777 aaPredicted RBP10.11□□□□□ -0.79
SS18-213ENST00000579640 PCDHGB4Q9UN71 923 aa10.11□□□□□ -0.79
SS18-213ENST00000579640 PTPRBP23467 1997 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 A0A1W2PRB8 838 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 ASPDHA6ND91 283 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 MYO1GB0I1T2 1018 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 FAM227AF5H4B4 570 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 FBP2O00757 339 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 AIM2O14862 343 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 NVLO15381 856 aaKnown RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 ERN1O75460 977 aaKnown RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 ERAL1O75616 437 aaKnown RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 TNFSF15O95150 251 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 BMP10O95393 424 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 DLGAP3O95886 979 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 CYC1P08574 325 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 CD82P27701 267 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 TRPC1P48995 793 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 PCBP4P57723 403 aaKnown RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 ART3Q13508 389 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 COL9A2Q14055 689 aaPredicted RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 MPEG1Q2M385 716 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 LACTB2Q53H82 288 aaPredicted RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 C6orf15Q6UXA7 325 aaPredicted RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 ZNF517Q6ZMY9 492 aaPredicted RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 QSOX2Q6ZRP7 698 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 COX15Q7KZN9 410 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 OVCH1Q7RTY7 1134 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 RETREG3Q86VR2 466 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 ZC3H7AQ8IWR0 971 aaKnown RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 TMEM52Q8NDY8 209 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 OR5P2Q8WZ92 322 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 GTF2H4Q92759 462 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 BBS4Q96RK4 519 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 NPAS2Q99743 824 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 SPRY4Q9C004 299 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 C1orf21Q9H246 121 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 NEUROD4Q9HD90 331 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 LANCL2Q9NS86 450 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 C5AR2Q9P296 337 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 NXT1Q9UKK6 140 aaKnown RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 PCDHGA7Q9Y5G6 932 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 CEP250Q9BV73 2442 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 KNTC1P50748 2209 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 SEC16AO15027 2179 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 FER1L5A0AVI2 2057 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 A0A096LPI6 279 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 DCDC2BA2VCK2 349 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 PMS2P1A4D2B8 440 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 FAM149AA5PLN7 773 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 B2RBV5 119 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 C9J4A7 227 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 RFXANKO14593 260 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 FGF17O60258 216 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 B4GALT2O60909 372 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 KCNH1O95259 989 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 KRT16P08779 473 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 CCNYL3P0C7X3 344 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 PORP16435 677 aaPredicted RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 RBMS1P29558 406 aaKnown RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 MPIP34949 423 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 CPA2P48052 419 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 NUDT2P50583 147 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 XKP51811 444 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 MANFP55145 182 aaKnown RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 GABREP78334 506 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 IGLV3-21P80748 117 aaPredicted RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 MXRA7P84157 204 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 FOLH1Q04609 750 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 STX4Q12846 297 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 SLC13A2Q13183 592 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 NFYCQ13952 458 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 SERTAD2Q14140 314 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 PRSS53Q2L4Q9 553 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 TRMT5Q32P41 509 aaKnown RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 PAGE3Q5JUK9 113 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 C6orf10Q5SRN2 563 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 CROCCQ5TZA2 2017 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 NUP210LQ5VU65 1888 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 SLC2A7Q6PXP3 512 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 DHDDSQ86SQ9 333 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 SCUBE1Q8IWY4 988 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 LRRC25Q8N386 305 aaPredicted RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 GALNT6Q8NCL4 622 aa10.1□□□□□ -0.79
SS18-213ENST00000579640 GOT1L1Q8NHS2 421 aaPredicted RBP10.1□□□□□ -0.79
SS18-213ENST00000579640 MR1Q95460 341 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms