RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 MBL2P11226 248 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 HNRNPA2B1P22626 353 aaKnown RBP4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 GIFP27352 417 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 FEN1P39748 380 aaKnown RBP4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 MATKP42679 507 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 NLRP11P59045 1033 aaKnown RBP4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 EFTUD2Q15029 972 aaKnown RBP eCLIP4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 KIAA1644Q3SXP7 199 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 POM121L1PQ3SYA9 428 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 CFAP157Q5JU67 520 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 WBP2NLQ6ICG8 309 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 RBMS3Q6XE24 437 aaKnown RBP4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 TRMT1LQ7Z2T5 733 aaKnown RBP4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 GOLGA7Q7Z5G4 137 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 ADGRD2Q7Z7M1 963 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 RFLNBQ8N5W9 214 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 STPG4Q8N801 248 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 STKLD1Q8NE28 680 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 GATAD1Q8WUU5 269 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 NUDCD2Q8WVJ2 157 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 TMEM37Q8WXS4 190 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 MRPL53Q96EL3 112 aaKnown RBP4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 NEDD4LQ96PU5 975 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 ERP44Q9BS26 406 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 DCTN5Q9BTE1 182 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 NDUFAF3Q9BU61 184 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 RMND5AQ9H871 391 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 LHX3Q9UBR4 397 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 ABCC4O15439 1325 aa4.11□□□□□ -1.75
TRAPPC8-203ENST00000577474 A0A1B0GUL7 405 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 FAM172BPA6NC97 362 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 MLNRO43193 412 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 RIPK2O43353 540 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 SMAD6O43541 496 aaKnown RBP4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 KRT86O43790 486 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 FGF17O60258 216 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 ECE2O60344 883 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 SPAG6O75602 509 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 GSTA1P08263 222 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 FGF3P11487 239 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 GPX3P22352 226 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 PTPN6P29350 595 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 FCGR2BP31994 310 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 LBX1P52954 281 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 LIMK2P53671 638 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 ACTR1AP61163 376 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 ABCE1P61221 599 aaKnown RBP4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 HERVK_113P63132 956 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 ERVK-8P63133 956 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 SPIBQ01892 262 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 GPM6BQ13491 265 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 KRT81Q14533 505 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 TAB1Q15750 504 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 C3AR1Q16581 482 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 SLC35E4Q6ICL7 350 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 SLC25A47Q6Q0C1 308 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 C9orf139Q6ZV77 190 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 C5orf24Q7Z6I8 188 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 TRPT1Q86TN4 253 aaKnown RBP4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 GCNT2Q8N0V5 402 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 KLHDC9Q8NEP7 349 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 KBTBD8Q8NFY9 601 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 OR5AP2Q8NGF4 316 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 OR4C3Q8NH37 302 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 CD99L2Q8TCZ2 262 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 RLN3Q8WXF3 142 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 SMPDL3AQ92484 453 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 SHC3Q92529 594 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 ERGIC2Q96RQ1 377 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 PAPOLGQ9BWT3 736 aaKnown RBP4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 ERVK-6Q9BXR3 956 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 SIX2Q9NPC8 291 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 GDF3Q9NR23 364 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 YAE1D1Q9NRH1 226 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 MAN2C1Q9NTJ4 1040 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 TECRQ9NZ01 308 aaKnown RBP4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 WWOXQ9NZC7 414 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 POMT2Q9UKY4 750 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 KIF16BQ96L93 1317 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 NPC1L1Q9UHC9 1359 aa4.1□□□□□ -1.75
TRAPPC8-203ENST00000577474 SURF4O15260 269 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 CFLARO15519 480 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 CRYAAP02489 173 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 ALPLP05186 524 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 PRSS1P07477 247 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 UMODP07911 640 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 LYNP07948 512 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 ASNSP08243 561 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 C4BPBP20851 252 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 GLRA1P23415 457 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 GLRA2P23416 452 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 IL4RP24394 825 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 ADRA1AP35348 466 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 FHITP49789 147 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 GUCY2DQ02846 1103 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 HAGHQ16775 308 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 TATDN3Q17R31 274 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 ZSWIM7Q19AV6 140 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 KRTAP27-1Q3LI81 207 aa4.09□□□□□ -1.75
TRAPPC8-203ENST00000577474 DCAF4L1Q3SXM0 396 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms