RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 EIF3FO00303 357 aaPredicted RBP5.82□□□□□ -1.48
NUP88-212ENST00000576708 CDC7O00311 574 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 DVL2O14641 736 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 SLC16A5O15375 505 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 TTI1O43156 1089 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 GALR3O60755 368 aaPredicted RBP5.82□□□□□ -1.48
NUP88-212ENST00000576708 SLC19A2O60779 497 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 SP1P08047 785 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 HIST1H2AGP0C0S8 130 aaPredicted RBP5.82□□□□□ -1.48
NUP88-212ENST00000576708 ALOX12P18054 663 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 CD53P19397 219 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 HIST1H2ADP20671 130 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 MAOAP21397 527 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 SAT1P21673 171 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 HRH2P25021 359 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 IVDP26440 423 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 HTR1EP28566 365 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 ELK3P41970 407 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 FNTAP49354 379 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 AGTR2P50052 363 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 CCR8P51685 355 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 SLC26A5P58743 744 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 IL2P60568 153 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 OC90Q02509 493 aaPredicted RBP5.82□□□□□ -1.48
NUP88-212ENST00000576708 SP140Q13342 867 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 ART3Q13508 389 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 EXT1Q16394 746 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 MEP1AQ16819 746 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 SPANXN3Q5MJ09 141 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 TEDDM1Q5T9Z0 273 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 CD276Q5ZPR3 534 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 DUPD1Q68J44 220 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 C3P1Q6ZMU1 363 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 GALNTL5Q7Z4T8 443 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 STRA8Q7Z7C7 330 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 PALM2Q8IXS6 379 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 SLC34A3Q8N130 599 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 PLPP5Q8NEB5 264 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 BHLHE22Q8NFJ8 381 aaPredicted RBP5.82□□□□□ -1.48
NUP88-212ENST00000576708 ABHD11Q8NFV4 315 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 OR4K1Q8NGD4 311 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 OR56A3Q8NH54 315 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 M1APQ8TC57 530 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 ACTRT1Q8TDG2 376 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 UTP15Q8TED0 518 aaKnown RBP5.82□□□□□ -1.48
NUP88-212ENST00000576708 CHAC2Q8WUX2 184 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 SLC5A11Q8WWX8 675 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 NEIL2Q969S2 332 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 TBC1D20Q96BZ9 403 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 FBXL8Q96CD0 374 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 CERS2Q96G23 380 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 SCMH1Q96GD3 660 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 HIST1H2AHQ96KK5 128 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 LPAR4Q99677 370 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 HIST1H2AJQ99878 128 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 UTP23Q9BRU9 249 aaKnown RBP5.82□□□□□ -1.48
NUP88-212ENST00000576708 H2AFJQ9BTM1 129 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 PCBD2Q9H0N5 130 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 MMP25Q9NPA2 562 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 PPANQ9NQ55 473 aaKnown RBP5.82□□□□□ -1.48
NUP88-212ENST00000576708 NECTIN3Q9NQS3 549 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 TRMT1Q9NXH9 659 aaKnown RBP5.82□□□□□ -1.48
NUP88-212ENST00000576708 TEKT2Q9UIF3 430 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 MAPRE3Q9UPY8 281 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 CHMP2BQ9UQN3 213 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 VWA7Q9Y334 891 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 PSAT1Q9Y617 370 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 SLC22A7Q9Y694 548 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 POLEQ07864 2286 aa5.82□□□□□ -1.48
NUP88-212ENST00000576708 ZGRF1Q86YA3 2104 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 GOLGA6L10A0A0M3HER8 536 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 TRBC2A0A5B9 178 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 NDC80O14777 642 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 PIAS1O75925 651 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 NEURL1O76050 574 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 S100BP04271 92 aaPredicted RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 FHP07954 510 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 SLC35G6P0C7Q6 338 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 CCND1P24385 295 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 EEF1DP29692 281 aaKnown RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 PPP2R1BP30154 601 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 THBS2P35442 1172 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 RFC3P40938 356 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 GDF5P43026 501 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 NR0B1P51843 470 aaKnown RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 TAS2R39P59534 338 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 AP2B1P63010 937 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 MRPS25P82663 173 aaKnown RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 REEP5Q00765 189 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 ALDH6A1Q02252 535 aaKnown RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 DBPQ10586 325 aaPredicted RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 CSHL1Q14406 222 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 RBBP5Q15291 538 aaKnown RBP5.81□□□□□ -1.48
NUP88-212ENST00000576708 MAPKAPK3Q16644 382 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 ZNF385BQ569K4 471 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 FBXO48Q5FWF7 155 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 TOR1AIP1Q5JTV8 583 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 SLC25A25Q6KCM7 469 aa5.81□□□□□ -1.48
NUP88-212ENST00000576708 LRRC8EQ6NSJ5 796 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms