RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 C1QTNF3Q9BXJ4 246 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 OR8D2Q9GZM6 311 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 TINAGQ9UJW2 476 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 NFU1Q9UMS0 254 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 ANGPTL3Q9Y5C1 460 aa16.17■□□□□ 0.18
SMG6-214ENST00000573827 A0A087WUV0 522 aaPredicted RBP16.16■□□□□ 0.18
SMG6-214ENST00000573827 A0A0G2JMM0 328 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 A0A1W2PPB8 328 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 A0A1W2PR48 441 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 A0A1W2PRS3 328 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 PINLYPA6NC86 204 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 KIR3DP1A8MWS1 328 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 CCL21O00585 134 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 PPP6CO00743 305 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 ADAM10O14672 748 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 PEX1O43933 1283 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 KRT38O76015 456 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 CLDN9O95484 217 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 CNTFP26441 200 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 PTGER1P34995 402 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 SOX3P41225 446 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 MEOX1P50221 254 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 SSR4P51571 173 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 NR0B1P51843 470 aaKnown RBP16.16■□□□□ 0.18
SMG6-214ENST00000573827 RNF4P78317 190 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 FOLH1Q04609 750 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 TIFABQ6ZNK6 161 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 POGLUT1Q8NBL1 392 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 UCN3Q969E3 161 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 SENP5Q96HI0 755 aaPredicted RBP16.16■□□□□ 0.18
SMG6-214ENST00000573827 MRPL57Q9BQC6 102 aaKnown RBP16.16■□□□□ 0.18
SMG6-214ENST00000573827 RPF2Q9H7B2 306 aaKnown RBP16.16■□□□□ 0.18
SMG6-214ENST00000573827 PLSCR2Q9NRY7 297 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 MS4A12Q9NXJ0 267 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 ZNF225Q9UK10 706 aa16.16■□□□□ 0.18
SMG6-214ENST00000573827 KLF13Q9Y2Y9 288 aaPredicted RBP16.16■□□□□ 0.18
SMG6-214ENST00000573827 POC1B-GALNT4F8VUJ3 575 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 KIF2AO00139 706 aaPredicted RBP16.15■□□□□ 0.18
SMG6-214ENST00000573827 WWP2O00308 870 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 SEMA3DO95025 777 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 CLPSP04118 112 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 RFC3P40938 356 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 RBPJQ06330 500 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 CDSNQ15517 529 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 TSNAXIP1Q2TAA8 658 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 GGTA1PQ4G0N0 100 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 CMPK2Q5EBM0 449 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 LYPD8Q6UX82 237 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 RPS27LQ71UM5 84 aaKnown RBP16.15■□□□□ 0.18
SMG6-214ENST00000573827 C9orf40Q8IXQ3 194 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 GPALPP1Q8IXQ4 340 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 TMEM156Q8N614 296 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 FAM98AQ8NCA5 519 aaKnown RBP16.15■□□□□ 0.18
SMG6-214ENST00000573827 LRRN4CLQ8ND94 238 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 CCDC168Q8NDH2 2452 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 PSD4Q8NDX1 1056 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 ZNF483Q8TF39 744 aaPredicted RBP16.15■□□□□ 0.18
SMG6-214ENST00000573827 SREK1Q8WXA9 508 aaKnown RBP16.15■□□□□ 0.18
SMG6-214ENST00000573827 TANKQ92844 425 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 TMEM125Q96AQ2 219 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 PPWD1Q96BP3 646 aaKnown RBP16.15■□□□□ 0.18
SMG6-214ENST00000573827 REPS1Q96D71 796 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 CCDC77Q9BR77 488 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 MRPL46Q9H2W6 279 aaKnown RBP16.15■□□□□ 0.18
SMG6-214ENST00000573827 PHF11Q9UIL8 331 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 TMCO1Q9UM00 188 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 SPACA6W5XKT8 324 aa16.15■□□□□ 0.18
SMG6-214ENST00000573827 A0A1W2PS29 197 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 A8MT66 165 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 NADKO95544 446 aaPredicted RBP16.14■□□□□ 0.17
SMG6-214ENST00000573827 AIFM1O95831 613 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 FAM153BP0C7A2 387 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 GRNP28799 593 aaKnown RBP16.14■□□□□ 0.17
SMG6-214ENST00000573827 RAP1GDS1P52306 607 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 GPR85P60893 370 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 ART3Q13508 389 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 FAM153CQ494X1 144 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 FRG2Q64ET8 278 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 ADGRD1Q6QNK2 874 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 GHDCQ8N2G8 530 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 MZB1Q8WU39 189 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 SCYL1Q96KG9 808 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 FRG2BQ96QU4 278 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 SH2D2AQ9NP31 389 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 LYARQ9NX58 379 aaKnown RBP16.14■□□□□ 0.17
SMG6-214ENST00000573827 SH3BGRL2Q9UJC5 107 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 ENTPD4Q9Y227 616 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 HRH3Q9Y5N1 445 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 EML6Q6ZMW3 1958 aa16.14■□□□□ 0.17
SMG6-214ENST00000573827 KLRC4-KLRK1H3BQV0 150 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 RIPK2O43353 540 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 GLSO94925 669 aaPredicted RBP16.13■□□□□ 0.17
SMG6-214ENST00000573827 GPR75O95800 540 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 MLYCDO95822 493 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 SNRPAP09012 282 aaKnown RBP16.13■□□□□ 0.17
SMG6-214ENST00000573827 FAM58BPP0C7Q3 252 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 MPEG1Q2M385 716 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 SPRED3Q2MJR0 410 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 PIGGQ5H8A4 983 aa16.13■□□□□ 0.17
SMG6-214ENST00000573827 LETMD1Q6P1Q0 360 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms