RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 FAM167BQ9BTA0 163 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 TSPY26PQ9H489 355 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 PROK2Q9HC23 129 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 XAB2Q9HCS7 855 aaKnown RBP11.27□□□□□ -0.61
SMIM28-201ENST00000573100 IARS2Q9NSE4 1012 aaKnown RBP11.27□□□□□ -0.61
SMIM28-201ENST00000573100 TRPS1Q9UHF7 1281 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 DAPP1Q9UN19 280 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 ZKSCAN5Q9Y2L8 839 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 CAPN6Q9Y6Q1 641 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 FREM3P0C091 2139 aa11.27□□□□□ -0.61
SMIM28-201ENST00000573100 SH3D21A4FU49 640 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 TRIM64A6NGJ6 449 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 TRIM64BA6NI03 449 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 ETHE1O95571 254 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 BMP7P18075 431 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 GDF1P27539 372 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 HPDP32754 393 aaPredicted RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 VPS41P49754 854 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 GPS1Q13098 491 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 TRIM40Q6P9F5 258 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 SYDE1Q6ZW31 735 aaPredicted RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 DND1Q8IYX4 353 aaKnown RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 RNF10Q8N5U6 811 aaKnown RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 C2CD4AQ8NCU7 369 aaPredicted RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 FAM13CQ8NE31 585 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 OR2L5Q8NG80 312 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 GABPB2Q8TAK5 448 aaPredicted RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 SENP5Q96HI0 755 aaPredicted RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 TRIB1Q96RU8 372 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 WDR83Q9BRX9 315 aaKnown RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 DOHHQ9BU89 302 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 RBM24Q9BX46 236 aaKnown RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 REXO4Q9GZR2 422 aaKnown RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 PRDM14Q9GZV8 571 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 HOMER3Q9NSC5 361 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 CAMK2AQ9UQM7 478 aa11.26□□□□□ -0.61
SMIM28-201ENST00000573100 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
SMIM28-201ENST00000573100 ROS1P08922 2347 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 KIAA1549Q9HCM3 1950 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 MBD3L4A6NDZ8 208 aaPredicted RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 MBD3L3A6NE82 208 aaPredicted RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 MBD3L5A6NJ08 208 aaPredicted RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 GOLGA8MH3BSY2 632 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 LDB3O75112 727 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 ERN1O75460 977 aaKnown RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 CLEC3AO75596 197 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 ACSL3O95573 720 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 C1GALT1C1LP0DN25 315 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 COX7A2P14406 83 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 GNAZP19086 355 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 CERS1P27544 350 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 GSTM2P28161 218 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 GABRB3P28472 473 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 SERPINB3P29508 390 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 MSH2P43246 934 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 RPL21P46778 160 aaKnown RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 ID2Q02363 134 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 CBLBQ13191 982 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 PDAP1Q13442 181 aaKnown RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 RBM20Q5T481 1227 aaKnown RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 VASNQ6EMK4 673 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 ABHD17CQ6PCB6 329 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 LYPD8Q6UX82 237 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 MCUQ8NE86 351 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 C7orf57Q8NEG2 295 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 OR10G3Q8NGC4 313 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 MBD3L2Q8NHZ7 208 aaPredicted RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 MAIP1Q8WWC4 291 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 COPS7BQ9H9Q2 264 aaPredicted RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 CALHM2Q9HA72 323 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 NDRG3Q9UGV2 375 aa11.25□□□□□ -0.61
SMIM28-201ENST00000573100 CHCHD2Q9Y6H1 151 aaPredicted RBP11.25□□□□□ -0.61
SMIM28-201ENST00000573100 ANKDD1BA6NHY2 528 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 DYRK3O43781 588 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 TRIM3O75382 744 aaPredicted RBP11.24□□□□□ -0.61
SMIM28-201ENST00000573100 CRLF1O75462 422 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 FGGP02679 453 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 AHSGP02765 367 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 FBXO45P0C2W1 286 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 TMIGD3P0DMS9 266 aaPredicted RBP11.24□□□□□ -0.61
SMIM28-201ENST00000573100 FPR1P21462 350 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 CPA2P48052 419 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 TGM3Q08188 693 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 SLBPQ14493 270 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMIM28-201ENST00000573100 ADPRMQ3LIE5 342 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 TBCELQ5QJ74 424 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 SBSNQ6UWP8 590 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 SLCO4C1Q6ZQN7 724 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 LUZP2Q86TE4 346 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 C9orf40Q8IXQ3 194 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 KRT78Q8N1N4 520 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 PERPQ96FX8 193 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 RBM18Q96H35 190 aaKnown RBP11.24□□□□□ -0.61
SMIM28-201ENST00000573100 PDLIM5Q96HC4 596 aaKnown RBP11.24□□□□□ -0.61
SMIM28-201ENST00000573100 SIGLEC10Q96LC7 697 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 SERPINB12Q96P63 405 aa11.24□□□□□ -0.61
SMIM28-201ENST00000573100 SECISBP2Q96T21 854 aaKnown RBP11.24□□□□□ -0.61
SMIM28-201ENST00000573100 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
SMIM28-201ENST00000573100 DESI2Q9BSY9 194 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms