RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 MYL9P24844 172 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 HLA-FP30511 346 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 MANFP55145 182 aaKnown RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM115Q12893 351 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 TARDBPQ13148 414 aaKnown RBP eCLIP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 HNRNPA0Q13151 305 aaKnown RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 BAK1Q16611 211 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 OCLNQ16625 522 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 RNLSQ5VYX0 342 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 ZNF770Q6IQ21 691 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 HSDL2Q6YN16 418 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 LAS2Q8IYD9 372 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 KRT78Q8N1N4 520 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 RASGEF1AQ8N9B8 481 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SLC43A3Q8NBI5 491 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 UBASH3BQ8TF42 649 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 FRMD6Q96NE9 622 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM121BQ9BXQ6 578 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 PAQR5Q9NXK6 330 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 HCN2Q9UL51 889 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM98Q9Y2Y6 226 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SNX11Q9Y5W9 270 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 PDE4DIPQ5VU43 2346 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 A6NL46 340 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 NME6O75414 186 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 ALDH1A1P00352 501 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 ITGB7P26010 798 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 RFX2P48378 723 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 NDUFA9Q16795 377 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 IER5LQ5T953 404 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 LCN1P1Q5VSP4 162 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 C12orf73Q69YU5 71 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 C19orf18Q8NEA5 215 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 OR5P2Q8WZ92 322 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 AP2M1Q96CW1 435 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 TTYH2Q9BSA4 534 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 ZCCHC2Q9C0B9 1178 aaKnown RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 ABCB9Q9NP78 766 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 DSPPQ9NZW4 1301 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 LEFTY2O00292 366 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 AP3D1O14617 1153 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SLC30A4O14863 429 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SEMA3DO95025 777 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 ELAVL4P26378 380 aaKnown RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SLC9A3P48764 834 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 KLHL22Q53GT1 634 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 HENMT1Q5T8I9 393 aaKnown RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 TRIQKQ629K1 86 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 MZT2BQ6NZ67 158 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 NXPE4Q6UWF7 544 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 NOXA1Q86UR1 476 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 PHC2Q8IXK0 858 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 CAMKK1Q8N5S9 505 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 LILRA3Q8N6C8 439 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 PSD4Q8NDX1 1056 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 OR9A1PQ8NGU1 263 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SLC7A6Q92536 515 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SLC25A46Q96AG3 418 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 WDR34Q96EX3 536 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM19Q96HH6 336 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 ZNF558Q96NG5 402 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 NELL2Q99435 816 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SLC6A16Q9GZN6 736 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 RERGLQ9H628 205 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 A4GALTQ9NPC4 353 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 NFKBIL1Q9UBC1 381 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SEC14L3Q9UDX4 400 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SPIN1Q9Y657 262 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 TLX2O43763 284 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 TPST2O60704 377 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 C1orf105O95561 183 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 ADRA2AP08913 450 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 NPPBP16860 134 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 SDC2P34741 201 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 E2F2Q14209 437 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 ZMAT1Q5H9K5 638 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 RPS26P11Q5JNZ5 115 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 PLET1Q6UQ28 207 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 ZNF557Q8N988 423 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 IL17RCQ8NAC3 791 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 FBXO15Q8NCQ5 510 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 MMP28Q9H239 520 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 NEUROD4Q9HD90 331 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 RPRD1BQ9NQG5 326 aaKnown RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 REV1Q9UBZ9 1251 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 DIMT1Q9UNQ2 313 aaKnown RBP10.24□□□□□ -0.77
CCDC40-207ENST00000572253 PLXNB3Q9ULL4 1909 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 A0A1W2PQL4 384 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 PDPK1O15530 556 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 GUCY1B2O75343 617 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 LGI1O95970 557 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 LRG1P02750 347 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 PDHA2P29803 388 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 INPP1P49441 399 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 LIM2P55344 173 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 ZNF79Q15937 498 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 MPEG1Q2M385 716 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 GPAT3Q53EU6 434 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 LINC00471Q8N535 108 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms