RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 CES1P1Q9UKY3 287 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 CCL27Q9Y4X3 112 aa8.1□□□□□ -1.11
SMG6-210ENST00000572205 HEMK1Q9Y5R4 338 aaPredicted RBP8.1□□□□□ -1.11
SMG6-210ENST00000572205 MYOCOSA0A1B0GUC4 107 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 SMIM23A6NLE4 172 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 MANBAO00462 879 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 PROM1O43490 865 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 CTNSO60931 367 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ZIC2O95409 532 aaPredicted RBP8.09□□□□□ -1.11
SMG6-210ENST00000572205 OTCP00480 354 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 F10P00742 488 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 GBAP04062 536 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ALPPP05187 535 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 KRT4P19013 534 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 SSR2P43308 183 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 CCNG1P51959 295 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 OR4D2P58180 307 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 DNAJB13P59910 316 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ID2Q02363 134 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 LCP2Q13094 533 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 DUSP8Q13202 625 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 TUBA3CQ13748 450 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ZNF169Q14929 603 aaPredicted RBP8.09□□□□□ -1.11
SMG6-210ENST00000572205 EXT1Q16394 746 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ACER2Q5QJU3 275 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 C10orf62Q5T681 223 aaPredicted RBP8.09□□□□□ -1.11
SMG6-210ENST00000572205 MFSD4BQ5TF39 518 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 RPUSD3Q6P087 351 aaKnown RBP8.09□□□□□ -1.11
SMG6-210ENST00000572205 TUBA3EQ6PEY2 450 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 COMMD6Q7Z4G1 85 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 CHERPQ8IWX8 916 aaKnown RBP8.09□□□□□ -1.11
SMG6-210ENST00000572205 IQCKQ8N0W5 287 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 RIBC1Q8N443 379 aaPredicted RBP8.09□□□□□ -1.11
SMG6-210ENST00000572205 B3GNT7Q8NFL0 401 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMG6-210ENST00000572205 CPT1CQ8TCG5 803 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 TRPC4APQ8TEL6 797 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ZNF721Q8TF20 911 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 METTL21AQ8WXB1 218 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 SCMH1Q96GD3 660 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 LPAR4Q99677 370 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 SLC29A3Q9BZD2 475 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ADAP2Q9NPF8 381 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 PRTFDC1Q9NRG1 225 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ASF1BQ9NVP2 202 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 OXSMQ9NWU1 459 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 SLC17A7Q9P2U7 560 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ITPR2Q14571 2701 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ICE1Q9Y2F5 2266 aa8.09□□□□□ -1.11
SMG6-210ENST00000572205 ZNF407Q9C0G0 2248 aa8.09□□□□□ -1.12
SMG6-210ENST00000572205 LRBAP50851 2863 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 CSMD2Q7Z408 3487 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 OR5H15A6NDH6 313 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 TCP11X1B4DZS4 312 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 NPIPB8E9PQR5 432 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 MYO1DO94832 1006 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 NADKO95544 446 aaPredicted RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 ESRRBO95718 433 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 PCSK2P16519 638 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 PTX3P26022 381 aaPredicted RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 TRHRP34981 398 aaPredicted RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 MLF1P58340 268 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 FOLH1Q04609 750 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 MRPL49Q13405 166 aaKnown RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 ELAVL1Q15717 326 aaKnown RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 HIST2H2ACQ16777 129 aaPredicted RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 PRSS53Q2L4Q9 553 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 SPRED3Q2MJR0 410 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 LGSNQ5TDP6 509 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 HIST2H2AA3Q6FI13 130 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 C16orf47Q6ZP98 133 aaPredicted RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 LIAT1Q6ZQX7 453 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 RNF165Q6ZSG1 346 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 GPRIN3Q6ZVF9 776 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 NUDT13Q86X67 352 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 MYLK4Q86YV6 388 aaPredicted RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 C9orf40Q8IXQ3 194 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 CDYL2Q8N8U2 506 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 ZNF441Q8N8Z8 693 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 SRFBP1Q8NEF9 429 aaKnown RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 DNAJB14Q8TBM8 379 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 RDH11Q8TC12 318 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 NCLNQ969V3 563 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 RGMAQ96B86 450 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 FAR2Q96K12 515 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 FCRL1Q96LA6 429 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 MECRQ9BV79 373 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 GATA5Q9BWX5 397 aaPredicted RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 ROGDIQ9GZN7 287 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 TUBB1Q9H4B7 451 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 BRF2Q9HAW0 419 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 SIRT5Q9NXA8 310 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 DCDC2Q9UHG0 476 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 ADAM29Q9UKF5 820 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 FBXW2Q9UKT8 454 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 EXO1Q9UQ84 846 aaKnown RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 TMA7Q9Y2S6 64 aaKnown RBP8.08□□□□□ -1.12
SMG6-210ENST00000572205 PLLPQ9Y342 182 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 ANGPTL3Q9Y5C1 460 aa8.08□□□□□ -1.12
SMG6-210ENST00000572205 PTGDR2Q9Y5Y4 395 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms