RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 ATCAYQ86WG3 371 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 RPS19BP1Q86WX3 136 aaKnown RBP12.5□□□□□ -0.41
RPAIN-207ENST00000570883 SRRM1Q8IYB3 904 aaKnown RBP12.5□□□□□ -0.41
RPAIN-207ENST00000570883 ZNF321PQ8N8H1 164 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 GALNT11Q8NCW6 608 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 GRHL3Q8TE85 626 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 VMP1Q96GC9 406 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 SIGLEC12Q96PQ1 595 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 TAAR6Q96RI8 345 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 TMEM109Q9BVC6 243 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 ROPN1BQ9BZX4 212 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-207ENST00000570883 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.5□□□□□ -0.41
RPAIN-207ENST00000570883 CDCP1Q9H5V8 836 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 ROPN1Q9HAT0 212 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-207ENST00000570883 BRF2Q9HAW0 419 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 MID1IP1Q9NPA3 183 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 OXSMQ9NWU1 459 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 MAP10Q9P2G4 905 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 STK38LQ9Y2H1 464 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 TIMM22Q9Y584 194 aa12.5□□□□□ -0.41
RPAIN-207ENST00000570883 COPG1Q9Y678 874 aaKnown RBP12.5□□□□□ -0.41
RPAIN-207ENST00000570883 GTF3C1Q12789 2109 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 A0A1W2PS29 197 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 SYNDIG1LA6NDD5 238 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 TMEM200CA6NKL6 621 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 PRAMEF2O60811 474 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 VPS4BO75351 444 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 SPAG7O75391 227 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 ESRRBO95718 433 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 KRT6AP02538 564 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 KRT6BP04259 564 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 ENO1P06733 434 aaKnown RBP12.49□□□□□ -0.41
RPAIN-207ENST00000570883 KLK1P06870 262 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 HSD3B1P14060 373 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 CREB1P16220 341 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 HSD3B2P26439 372 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 BUD31P41223 144 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-207ENST00000570883 STT3AP46977 705 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 KRT6CP48668 564 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 CLCN2P51788 898 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 MLF1P58340 268 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 SRSF1Q07955 248 aaKnown RBP eCLIP12.49□□□□□ -0.41
RPAIN-207ENST00000570883 ZNF844Q08AG5 666 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 CSTF3Q12996 717 aaKnown RBP12.49□□□□□ -0.41
RPAIN-207ENST00000570883 RPUSD3Q6P087 351 aaKnown RBP12.49□□□□□ -0.41
RPAIN-207ENST00000570883 C10orf107Q8IVU9 208 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 MMP21Q8N119 569 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 TMEM132CQ8N3T6 1108 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 C1orf52Q8N6N3 182 aaKnown RBP12.49□□□□□ -0.41
RPAIN-207ENST00000570883 CCDC63Q8NA47 563 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 OR14A16Q8NHC5 309 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 METTL6Q8TCB7 284 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 THAP3Q8WTV1 239 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-207ENST00000570883 TANKQ92844 425 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 HES7Q9BYE0 225 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 DEFB126Q9BYW3 111 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 ACPTQ9BZG2 426 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 SLC17A7Q9P2U7 560 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 ADAM29Q9UKF5 820 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 VPS4AQ9UN37 437 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 PLLPQ9Y342 182 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 CLCA3PQ9Y6N3 262 aa12.49□□□□□ -0.41
RPAIN-207ENST00000570883 ARHGAP10A1A4S6 786 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 CLEC18AA5D8T8 446 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 C17orf105B2RV13 164 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 HRKO00198 91 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 PGRMC2O15173 223 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 NEURL1O76050 574 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 HMOX2P30519 316 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 TLX1P31314 330 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-207ENST00000570883 HMGCS1Q01581 520 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 MRPL49Q13405 166 aaKnown RBP12.48□□□□□ -0.41
RPAIN-207ENST00000570883 NR6A1Q15406 480 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 OR1C1Q15619 314 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 CCNYL2Q5T2Q4 361 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 LIPMQ5VYY2 423 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 OR52E8Q6IFG1 317 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 SCIMPQ6UWF3 145 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 CLEC18BQ6UXF7 455 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 C16orf47Q6ZP98 133 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-207ENST00000570883 PAGE2Q7Z2X7 111 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 ZNF227Q86WZ6 799 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 CLEC18CQ8NCF0 446 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 MORN4Q8NDC4 146 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 SLC2A12Q8TD20 617 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 DOK4Q8TEW6 326 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
RPAIN-207ENST00000570883 PPWD1Q96BP3 646 aaKnown RBP12.48□□□□□ -0.41
RPAIN-207ENST00000570883 UTP23Q9BRU9 249 aaKnown RBP12.48□□□□□ -0.41
RPAIN-207ENST00000570883 OR8D2Q9GZM6 311 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 AHSPQ9NZD4 102 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 ABI3Q9P2A4 366 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 VPS29Q9UBQ0 182 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 ICE1Q9Y2F5 2266 aa12.48□□□□□ -0.41
RPAIN-207ENST00000570883 ULK1O75385 1050 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 CBX6O95503 412 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 GPR75O95800 540 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 IGKV3-11P04433 115 aa12.47□□□□□ -0.41
RPAIN-207ENST00000570883 ALOX15P16050 662 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-207ENST00000570883 TRHRP34981 398 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms