RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TBCDQ9BTW9 1192 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 ZDHHC11Q9H8X9 412 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 DMRT3Q9NQL9 472 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 NPDC1Q9NQX5 325 aaPredicted RBP12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 PPT2Q9UMR5 302 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 MRPS33Q9Y291 106 aaKnown RBP12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 ATG4BQ9Y4P1 393 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 CLCA3PQ9Y6N3 262 aa12.82□□□□□ -0.36
GTF3C1-211ENST00000569653 A8MVJ9 347 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 PRRG2O14669 202 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 TMPRSS11DO60235 418 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 KLK8O60259 260 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 ALDOAP04075 364 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 CLPSP04118 112 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 S100BP04271 92 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 CCL3P10147 92 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 STX4Q12846 297 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 SLAMF1Q13291 335 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 LAPTM5Q13571 262 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 DDX39BQ13838 428 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 NAA30Q147X3 362 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 SETDB1Q15047 1291 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 TMEM35AQ53FP2 167 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 PAGE2BQ5JRK9 111 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 RAPH1Q70E73 1250 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 GDF7Q7Z4P5 450 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 PLD6Q8N2A8 252 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 TEX9Q8N6V9 391 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 PPWD1Q96BP3 646 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 SDCCAG3Q96C92 435 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 MRRFQ96E11 262 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 MTERF1Q99551 399 aaKnown RBP12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 TREX2Q9BQ50 279 aaPredicted RBP12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 CCDC77Q9BR77 488 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 TTTY12Q9BZ98 90 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 NMRAL1Q9HBL8 299 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 SH2D2AQ9NP31 389 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 TIMMDC1Q9NPL8 285 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 SNX15Q9NRS6 342 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 ZNF358Q9NW07 568 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 HPF1Q9NWY4 346 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 OPTCQ9UBM4 332 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 TNFRSF10DQ9UBN6 386 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 ERVK-11Q9UQG0 969 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 MED12Q93074 2177 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 KIAA1549Q9HCM3 1950 aa12.81□□□□□ -0.36
GTF3C1-211ENST00000569653 SIX3O95343 332 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 CPN2P22792 545 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 CRABP2P29373 138 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 BSGP35613 385 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 SSR2P43308 183 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 STT3AP46977 705 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 DNASE1L1P49184 302 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 RPS13P62277 151 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 PPIAP62937 165 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 FOLH1Q04609 750 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 TFF3Q07654 80 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 TGM3Q08188 693 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 MROH9Q5TGP6 573 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 OR4C11Q6IEV9 310 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 MRM1Q6IN84 353 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 TBC1D1Q86TI0 1168 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 CCDC71Q8IV32 467 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 TMEM251Q8N6I4 163 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 OR8K3Q8NH51 312 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 DAZLQ92904 295 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 SENP5Q96HI0 755 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 ENKD1Q9H0I2 346 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 CDC42EP4Q9H3Q1 356 aaKnown RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 PROK2Q9HC23 129 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 PNPLA3Q9NST1 481 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 TUBA8Q9NY65 449 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 NINJ2Q9NZG7 142 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 ACOT9Q9Y305 439 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 ASB4Q9Y574 426 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 MAP1AP78559 2803 aaPredicted RBP12.8□□□□□ -0.36
GTF3C1-211ENST00000569653 AKAP6Q13023 2319 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 A0A0A6YYD5 115 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 A0A1W2PR48 441 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 NKX2-6A6NCS4 301 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 EPB42P16452 691 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 IGFBP2P18065 325 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 ENDOUP21128 410 aaKnown RBP12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 ECHS1P30084 290 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 MAGEA5P43359 124 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 PIK3CGP48736 1102 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 NEK2P51955 445 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 TNFRSF17Q02223 184 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 ASPHQ12797 758 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 SERTAD2Q14140 314 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 HIST2H2ACQ16777 129 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 PFKFB4Q16877 469 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 AP5B1Q2VPB7 878 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 ZNF791Q3KP31 576 aaPredicted RBP12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 HIST2H2AA3Q6FI13 130 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 RTL4Q6ZR62 310 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 GOLGA7Q7Z5G4 137 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 CCDC91Q7Z6B0 441 aa12.79□□□□□ -0.36
GTF3C1-211ENST00000569653 GPALPP1Q8IXQ4 340 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms