RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 NKD1Q969G9 470 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 GFM2Q969S9 779 aaKnown RBP13.92□□□□□ -0.18
SPG7-213ENST00000566221 KIAA1143Q96AT1 154 aaPredicted RBP13.92□□□□□ -0.18
SPG7-213ENST00000566221 PPCDCQ96CD2 204 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 ZBTB18Q99592 522 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 SPSB2Q99619 263 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 GPR87Q9BY21 358 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 ACTL8Q9H568 366 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 PRTFDC1Q9NRG1 225 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 TMEM45AQ9NWC5 275 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 ATP6V1HQ9UI12 483 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 PSME2Q9UL46 239 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 IGF2RP11717 2491 aa13.92□□□□□ -0.18
SPG7-213ENST00000566221 GLOD5A6NK44 160 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 TERTO14746 1132 aaKnown RBP13.91□□□□□ -0.18
SPG7-213ENST00000566221 SLC22A3O75751 556 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 CDC123O75794 336 aaPredicted RBP13.91□□□□□ -0.18
SPG7-213ENST00000566221 COX7A2P14406 83 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 GPX3P22352 226 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 DLSTP36957 453 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 FOLR3P41439 243 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 NME5P56597 212 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 UFM1P61960 85 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 RHAGQ02094 409 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 SLC13A2Q13183 592 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 ERV3-1Q14264 604 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 CAMKMTQ7Z624 323 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 TICAM1Q8IUC6 712 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 PRSS58Q8IYP2 241 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 SAMD14Q8IZD0 417 aaPredicted RBP13.91□□□□□ -0.18
SPG7-213ENST00000566221 SHISA5Q8N114 240 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 CPSF7Q8N684 471 aaKnown RBP13.91□□□□□ -0.18
SPG7-213ENST00000566221 C7orf57Q8NEG2 295 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 OR2Y1Q8NGV0 311 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 TESCQ96BS2 214 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 KLHL29Q96CT2 875 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 PRPF18Q99633 342 aaKnown RBP13.91□□□□□ -0.18
SPG7-213ENST00000566221 VN1R1Q9GZP7 353 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 NMUR2Q9GZQ4 415 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 MYLK2Q9H1R3 596 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 CLMPQ9H6B4 373 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 SOX17Q9H6I2 414 aaPredicted RBP13.91□□□□□ -0.18
SPG7-213ENST00000566221 SAR1AQ9NR31 198 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 GIMAP4Q9NUV9 329 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 ATAD3AQ9NVI7 634 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 DKK4Q9UBT3 224 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 KCND3Q9UK17 655 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 UTS2RQ9UKP6 389 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 MKL2Q9ULH7 1088 aa13.91□□□□□ -0.18
SPG7-213ENST00000566221 EXO1Q9UQ84 846 aaKnown RBP13.91□□□□□ -0.18
SPG7-213ENST00000566221 PTRH2Q9Y3E5 179 aaKnown RBP13.91□□□□□ -0.18
SPG7-213ENST00000566221 LOC101059948A0A1B0GTJ6 334 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 IDSB3KWA1 339 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 FCHO1O14526 889 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 PGRMC2O15173 223 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 CTNSO60931 367 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 HEXBP07686 556 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 PIK3R1P27986 724 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 FOLH1Q04609 750 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 SRSF11Q05519 484 aaKnown RBP13.9□□□□□ -0.18
SPG7-213ENST00000566221 UGT8Q16880 541 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 SHISA6Q6ZSJ9 500 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 MTDHQ86UE4 582 aaKnown RBP13.9□□□□□ -0.18
SPG7-213ENST00000566221 OR7A2PQ8NGA2 310 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 OR4K14Q8NGD5 310 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 SNIP1Q8TAD8 396 aaKnown RBP13.9□□□□□ -0.18
SPG7-213ENST00000566221 FGF11Q92914 225 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 SLC45A3Q96JT2 553 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 TEX37Q96LM6 180 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 CRB3Q9BUF7 120 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 EFHD1Q9BUP0 239 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 GPN2Q9H9Y4 310 aaPredicted RBP13.9□□□□□ -0.18
SPG7-213ENST00000566221 TAS2R7Q9NYW3 318 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 C5AR2Q9P296 337 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 C3orf18Q9UK00 162 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 CES1P1Q9UKY3 287 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 TCFL5Q9UL49 500 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 ENTPD4Q9Y227 616 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 FARSAQ9Y285 508 aaKnown RBP13.9□□□□□ -0.18
SPG7-213ENST00000566221 PCDHGA6Q9Y5G7 932 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 FREM2Q5SZK8 3169 aa13.9□□□□□ -0.18
SPG7-213ENST00000566221 IGKV3D-11A0A0A0MRZ8 115 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 FAM234BA2RU67 622 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 GABRR3A8MPY1 467 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 PCDH17O14917 1159 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 PDPK1O15530 556 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 FGF17O60258 216 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 LDB3O75112 727 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 ERAL1O75616 437 aaKnown RBP13.89□□□□□ -0.19
SPG7-213ENST00000566221 KLF7O75840 302 aaPredicted RBP13.89□□□□□ -0.19
SPG7-213ENST00000566221 ATP5HO75947 161 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 ZIC2O95409 532 aaPredicted RBP13.89□□□□□ -0.19
SPG7-213ENST00000566221 GPR75O95800 540 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 RECKO95980 971 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 MAOAP21397 527 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 PTPN4P29074 926 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 NTSP30990 170 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 BTG2P78543 158 aa13.89□□□□□ -0.19
SPG7-213ENST00000566221 IGLV3-21P80748 117 aaPredicted RBP13.89□□□□□ -0.19
SPG7-213ENST00000566221 STX4Q12846 297 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms