RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 ASCL3Q9NQ33 180 aa17.68■□□□□ 0.42
SPNS1-206ENST00000564476 PRTFDC1Q9NRG1 225 aa17.68■□□□□ 0.42
SPNS1-206ENST00000564476 LANCL2Q9NS86 450 aa17.68■□□□□ 0.42
SPNS1-206ENST00000564476 ACSS1Q9NUB1 689 aaPredicted RBP17.68■□□□□ 0.42
SPNS1-206ENST00000564476 FAM120CQ9NX05 1096 aaKnown RBP17.68■□□□□ 0.42
SPNS1-206ENST00000564476 TPRP12270 2363 aaKnown RBP17.68■□□□□ 0.42
SPNS1-206ENST00000564476 ACACBO00763 2458 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 CCDC88CQ9P219 2028 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 NUP210LQ5VU65 1888 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 PRSS51A0A1B0GVH4 220 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 BBIP1A8MTZ0 92 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 FAM227AF5H4B4 570 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 PCDH17O14917 1159 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 B4GALT2O60909 372 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 ZGLP1P0C6A0 271 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 CSNK2A2P19784 350 aaPredicted RBP17.67■□□□□ 0.42
SPNS1-206ENST00000564476 SPINK2P20155 84 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 MPIP34949 423 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 FRKP42685 505 aaPredicted RBP17.67■□□□□ 0.42
SPNS1-206ENST00000564476 MNAT1P51948 309 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 MLC1Q15049 377 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 NKG7Q16617 165 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 PGS1Q32NB8 556 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 SPANXN4Q5MJ08 99 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 MLIPQ5VWP3 458 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 OR7A2PQ8NGA2 310 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 OR9I1Q8NGQ6 314 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 DNAJB8Q8NHS0 232 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 KLHL29Q96CT2 875 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 ZBED6CLQ96FA7 236 aaPredicted RBP17.67■□□□□ 0.42
SPNS1-206ENST00000564476 ZNF578Q96N58 590 aaPredicted RBP17.67■□□□□ 0.42
SPNS1-206ENST00000564476 PELOQ9BRX2 385 aaKnown RBP17.67■□□□□ 0.42
SPNS1-206ENST00000564476 GPR87Q9BY21 358 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 SLC52A3Q9NQ40 469 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 ENTPD4Q9Y227 616 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 PADI2Q9Y2J8 665 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 NDUFAF1Q9Y375 327 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 NEUROG3Q9Y4Z2 214 aa17.67■□□□□ 0.42
SPNS1-206ENST00000564476 C21orf140B9A014 251 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 EBAG9O00559 213 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 RNASET2O00584 256 aaKnown RBP17.66■□□□□ 0.42
SPNS1-206ENST00000564476 LAMP1P11279 417 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 PCBP4P57723 403 aaKnown RBP17.66■□□□□ 0.42
SPNS1-206ENST00000564476 IGLV3-21P80748 117 aaPredicted RBP17.66■□□□□ 0.42
SPNS1-206ENST00000564476 STX4Q12846 297 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 SLC13A2Q13183 592 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 VWA2Q5GFL6 755 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 RIPOR1Q6ZS17 1223 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 TIPARPQ7Z3E1 657 aaKnown RBP17.66■□□□□ 0.42
SPNS1-206ENST00000564476 MARCH9Q86YJ5 346 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 TREML1Q86YW5 311 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 SCUBE1Q8IWY4 988 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 ZFP28Q8NHY6 868 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 NACC2Q96BF6 587 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 OR52E6Q96RD3 313 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 BTNL2Q9UIR0 455 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 LEF1Q9UJU2 399 aaPredicted RBP17.66■□□□□ 0.42
SPNS1-206ENST00000564476 MSRB2Q9Y3D2 182 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 AK5Q9Y6K8 562 aa17.66■□□□□ 0.42
SPNS1-206ENST00000564476 MAP1BP46821 2468 aaKnown RBP17.65■□□□□ 0.42
SPNS1-206ENST00000564476 NUP214P35658 2090 aaPredicted RBP17.65■□□□□ 0.42
SPNS1-206ENST00000564476 SDK2Q58EX2 2172 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 LOC100653049A0A140TA62 436 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 TRABD2BA6NFA1 517 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 GLOD5A6NK44 160 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 MYO1GB0I1T2 1018 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 NR5A2O00482 541 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 ANGPT2O15123 496 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 RAD1O60671 282 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 ERAL1O75616 437 aaKnown RBP17.65■□□□□ 0.42
SPNS1-206ENST00000564476 KRT34O76011 436 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 NPPAP01160 153 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 SLC35E2P0CK97 266 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 COX4I1P13073 169 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 PORP16435 677 aaPredicted RBP17.65■□□□□ 0.42
SPNS1-206ENST00000564476 NTSP30990 170 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 GALNSP34059 522 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 XKP51811 444 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 RPS15P62841 145 aaKnown RBP17.65■□□□□ 0.42
SPNS1-206ENST00000564476 FOLH1Q04609 750 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 NCF4Q15080 339 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 MAPKAPK3Q16644 382 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 VPS26BQ4G0F5 336 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 FAM198BQ6UWH4 519 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 DTX1Q86Y01 620 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 MMP21Q8N119 569 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 TMEM52Q8NDY8 209 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 OR5P2Q8WZ92 322 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 EXOSC8Q96B26 276 aaKnown RBP17.65■□□□□ 0.42
SPNS1-206ENST00000564476 ANKRD9Q96BM1 317 aaPredicted RBP17.65■□□□□ 0.42
SPNS1-206ENST00000564476 NSL1Q96IY1 281 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 ITCHQ96J02 903 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 ZNF681Q96N22 645 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 PTCHD1Q96NR3 888 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 BBS4Q96RK4 519 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 CTSFQ9UBX1 484 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 TAGLN3Q9UI15 199 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 PCDHGB4Q9UN71 923 aa17.65■□□□□ 0.42
SPNS1-206ENST00000564476 A0A1W2PRB8 838 aa17.64■□□□□ 0.41
SPNS1-206ENST00000564476 PDPK1O15530 556 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms