RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 CLEC3AO75596 197 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 SNRNP200O75643 2136 aaKnown RBP16.81■□□□□ 0.28
GDE1-203ENST00000564172 PIAS2O75928 621 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 HOXB3P14651 431 aaPredicted RBP16.81■□□□□ 0.28
GDE1-203ENST00000564172 OPRL1P41146 370 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 BCL6P41182 706 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 OR3A3P47888 321 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 NKX2-5P52952 324 aaPredicted RBP16.81■□□□□ 0.28
GDE1-203ENST00000564172 CDH15P55291 814 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 NFYCQ13952 458 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 ARL14Q8N4G2 192 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 MINDY1Q8N5J2 469 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 DPP10Q8N608 796 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 CREB3L4Q8TEY5 395 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 RAB2BQ8WUD1 216 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 SLC13A3Q8WWT9 602 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 F2RL3Q96RI0 385 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 COPS7BQ9H9Q2 264 aaPredicted RBP16.81■□□□□ 0.28
GDE1-203ENST00000564172 SPAG4Q9NPE6 437 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 HRASLS2Q9NWW9 162 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 UCKL1Q9NWZ5 548 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 DCAF16Q9NXF7 216 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 NPAP1Q9NZP6 1156 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 AP3M1Q9Y2T2 418 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 ENTPD2Q9Y5L3 495 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 GNG14A0A1W2PPG7 69 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 ISPDA4D126 451 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 SNPHO15079 494 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 PPM1DO15297 605 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 NOBOXO60393 691 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 PRMT3O60678 531 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 SEMA3DO95025 777 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 GBAP04062 536 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 FASLGP48023 281 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 TRAP1Q12931 704 aaKnown RBP16.81■□□□□ 0.28
GDE1-203ENST00000564172 CEACAM7Q14002 265 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 DEFB133Q30KQ1 61 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.81■□□□□ 0.28
GDE1-203ENST00000564172 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.81■□□□□ 0.28
GDE1-203ENST00000564172 LHFPL5Q8TAF8 219 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 PKP2Q99959 881 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 ERVMER34-1Q9H9K5 563 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 AHSPQ9NZD4 102 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 ADA2Q9NZK5 511 aa16.81■□□□□ 0.28
GDE1-203ENST00000564172 PLPP1O14494 284 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 PDPK1O15530 556 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 AKAP10O43572 662 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 HRO43593 1189 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 ASMTP46597 345 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 CAPRIN1Q14444 709 aaKnown RBP16.8■□□□□ 0.28
GDE1-203ENST00000564172 PLK5Q496M5 336 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 PAQR7Q86WK9 346 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 C17orf82Q86X59 251 aaPredicted RBP16.8■□□□□ 0.28
GDE1-203ENST00000564172 TBC1D19Q8N5T2 526 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 RNF148Q8N7C7 305 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 CDC26Q8NHZ8 85 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 PNPT1Q8TCS8 783 aaKnown RBP16.8■□□□□ 0.28
GDE1-203ENST00000564172 TMEM181Q9P2C4 612 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 VPS4AQ9UN37 437 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 C2orf74A8MZ97 194 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 TNFSF14O43557 240 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 KLHL18O94889 574 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 NPPAP01160 153 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 SERPIND1P05546 499 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 KLK1P06870 262 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 ANXA6P08133 673 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 GNSP15586 552 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 MAGP20916 626 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 S100A3P33764 101 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 AHRP35869 848 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 CASP3P42574 277 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 CTSKP43235 329 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 C21orf58P58505 322 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 MAPKAPK3Q16644 382 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 UGT8Q16880 541 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 OGFOD3Q6PK18 319 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 FKBP9P1Q75LS8 142 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 AVL9Q8NBF6 648 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.8■□□□□ 0.281e-7■■■■□ 24.3
GDE1-203ENST00000564172 GTF2H4Q92759 462 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 OR52E6Q96RD3 313 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 TM9SF2Q99805 663 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 SORBS1Q9BX66 1292 aaKnown RBP16.8■□□□□ 0.28
GDE1-203ENST00000564172 RAD21L1Q9H4I0 556 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 PCDHGA2Q9Y5H1 932 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 SNX11Q9Y5W9 270 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 AP1M2Q9Y6Q5 423 aa16.8■□□□□ 0.28
GDE1-203ENST00000564172 OR2A25A4D2G3 310 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 SLC6A2P23975 617 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 GSTM2P28161 218 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 SLC7A2P52569 658 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 FOXM1Q08050 763 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 ZNF763Q0D2J5 394 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 ZIC1Q15915 447 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 HKDC1Q2TB90 917 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 SPESP1Q6UW49 350 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 DLEU7Q6UYE1 221 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 DTWD2Q8NBA8 298 aa16.79■□□□□ 0.28
GDE1-203ENST00000564172 YTHDF1Q9BYJ9 559 aaKnown RBP16.79■□□□□ 0.28
GDE1-203ENST00000564172 SYNPO2LQ9H987 977 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms