RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 A0A075B6Q4 140 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 REM1O75628 298 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 ZNF806P0C7X5 589 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 GSTM3P21266 225 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 TIA1P31483 386 aaKnown RBP eCLIP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 HK3P52790 923 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 CBX2Q14781 532 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 FNDC3BQ53EP0 1204 aaKnown RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 CCDC157Q569K6 752 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 PRPF38BQ5VTL8 546 aaKnown RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 MEDAGQ5VYS4 303 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 TXNDC8Q6A555 127 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 SFRP4Q6FHJ7 346 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 GDF6Q6KF10 455 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-209ENST00000564068 SLC36A4Q6YBV0 504 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 LINC00299Q6ZSB3 139 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 USP51Q70EK9 711 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 OR2AP1Q8NGE2 309 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 FERD3LQ96RJ6 166 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 FKBP7Q9Y680 259 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 STON1Q9Y6Q2 735 aa12.07□□□□□ -0.48
COMMD4-209ENST00000564068 KIAA1551Q9HCM1 1747 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 ARID1AO14497 2285 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 A0A0G2JPF8 293 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 TEX13CA0A0J9YWL9 993 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 HNRNPCL3B7ZW38 293 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 KMOO15229 486 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 PI15O43692 258 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 OR6A2O95222 327 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 HMGN1P05114 100 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 MRPL3P09001 348 aaKnown RBP12.06□□□□□ -0.48
COMMD4-209ENST00000564068 HNRNPCL4P0DMR1 293 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 ACRV1P26436 265 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 ZNF140P52738 457 aaPredicted RBP12.06□□□□□ -0.48
COMMD4-209ENST00000564068 RBBP4Q09028 425 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 VEZF1Q14119 521 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 LARS2Q15031 903 aaKnown RBP12.06□□□□□ -0.48
COMMD4-209ENST00000564068 MARCH8Q5T0T0 291 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 CCSAPQ6IQ19 270 aaPredicted RBP12.06□□□□□ -0.48
COMMD4-209ENST00000564068 MTFR2Q6P444 385 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 GDPGP1Q6ZNW5 385 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 TSPAN33Q86UF1 283 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 RIMKLAQ8IXN7 391 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 ZNF366Q8N895 744 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 GALNT11Q8NCW6 608 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 OR6K6Q8NGW6 343 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 HUS1BQ8NHY5 278 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 DNAJA4Q8WW22 397 aaPredicted RBP12.06□□□□□ -0.48
COMMD4-209ENST00000564068 SLC7A6Q92536 515 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 PLD4Q96BZ4 506 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 HRASLS5Q96KN8 279 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 ZIC5Q96T25 663 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 EPYCQ99645 322 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 IL26Q9NPH9 171 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 PCDHGB2Q9Y5G2 931 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 C2orf78A6NCI8 922 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 I6L893 689 aaPredicted RBP12.06□□□□□ -0.48
COMMD4-209ENST00000564068 RTCAO00442 366 aaKnown RBP12.06□□□□□ -0.48
COMMD4-209ENST00000564068 HPGDSO60760 199 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 IL3P08700 152 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 PSMA6P60900 246 aaKnown RBP12.06□□□□□ -0.48
COMMD4-209ENST00000564068 NKG7Q16617 165 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 C4orf46Q504U0 113 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 MPPE1Q53F39 396 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 CTSL3PQ5NE16 218 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 OR2G6Q5TZ20 316 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 TMIGD1Q6UXZ0 262 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 CCDC36Q8IYA8 594 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 TRIM36Q9NQ86 728 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 SCAMP1O15126 338 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 PROM1O43490 865 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 C8orf89P0DMQ9 161 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 MTNR1AP48039 350 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 FAPQ12884 760 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 FADDQ13158 208 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 RPS26P11Q5JNZ5 115 aaPredicted RBP12.06□□□□□ -0.48
COMMD4-209ENST00000564068 Q6ZVU0 165 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 OR4K5Q8NGD3 323 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 PSD2Q9BQI7 771 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 KCNK12Q9HB15 430 aa12.06□□□□□ -0.48
COMMD4-209ENST00000564068 BRWD3Q6RI45 1802 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 SDK1Q7Z5N4 2213 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 SCAMP2O15127 329 aaKnown RBP12.05□□□□□ -0.48
COMMD4-209ENST00000564068 CLEC2LP0C7M8 214 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 OR12D1P0DN82 309 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 OSMP13725 252 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 HK1P19367 917 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 ACVR1BP36896 505 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 HTR3AP46098 478 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 SNTA1Q13424 505 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 RAB41Q5JT25 222 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 KDM4DQ6B0I6 523 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 PHYKPLQ8IUZ5 450 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 SLAIN1Q8ND83 568 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 CEP76Q8TAP6 659 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 P2RY13Q9BPV8 354 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 LMAN2LQ9H0V9 348 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 CD93Q9NPY3 652 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 B4GALT6Q9UBX8 382 aa12.05□□□□□ -0.48
COMMD4-209ENST00000564068 EXOSC1Q9Y3B2 195 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms