RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 WBP1Q96G27 269 aa16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 LPAR4Q99677 370 aa16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 ILKAPQ9H0C8 392 aaPredicted RBP16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 ADNPQ9H2P0 1102 aa16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 MANSC1Q9H8J5 431 aa16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 LRTM1Q9HBL6 345 aa16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 ZBTB20Q9HC78 741 aaPredicted RBP16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 GPR83Q9NYM4 423 aa16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 HEY2Q9UBP5 337 aa16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 DLGAP4Q9Y2H0 992 aa16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 RAP2CQ9Y3L5 183 aa16.33■□□□□ 0.2
CCNDBP1-204ENST00000563065 FAM208BQ5VWN6 2430 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 IL3P08700 152 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 ANXA4P09525 319 aaPredicted RBP16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 RPL14P50914 215 aaKnown RBP16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 SOX8P57073 446 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 SLC26A5P58743 744 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 PPP2R2AP63151 447 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 MYBPC3Q14896 1274 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 PDCD2Q16342 344 aaPredicted RBP16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 GALNTL6Q49A17 601 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 RFTN2Q52LD8 501 aaPredicted RBP16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 COLEC12Q5KU26 742 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 PLAG1Q6DJT9 500 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 GALNT18Q6P9A2 607 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 RNF165Q6ZSG1 346 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 KIF2BQ8N4N8 673 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 NFAM1Q8NET5 270 aaPredicted RBP16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 C9orf43Q8TAL5 461 aaPredicted RBP16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 PTPMT1Q8WUK0 201 aaPredicted RBP16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 PSMF1Q92530 271 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 LHPPQ9H008 270 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 C1orf109Q9NX04 203 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 SIRT5Q9NXA8 310 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 VTI1BQ9UEU0 232 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 PCDHA9Q9Y5H5 950 aa16.32■□□□□ 0.2
CCNDBP1-204ENST00000563065 BLACEA4D250 179 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 SAGE2PA6NJ88 616 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 LSM1O15116 133 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 PEX11AO75192 247 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 SNNO75324 88 aaPredicted RBP16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 GPR75O95800 540 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 SERPINA7P05543 415 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 PRPH2P23942 346 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 TACR1P25103 407 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 ALDH9A1P49189 494 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 ST13P50502 369 aaKnown RBP16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 IGLV3-21P80748 117 aaPredicted RBP16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 XKR7Q5GH72 579 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 B3GNTL1Q67FW5 361 aaPredicted RBP16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 NOXRED1Q6NXP6 359 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 CDC26Q8NHZ8 85 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 ZNF75CPQ92670 426 aaPredicted RBP16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 WDR41Q9HAD4 459 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 PTGFRNQ9P2B2 879 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 TUBD1Q9UJT1 453 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 CES1P1Q9UKY3 287 aa16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.31■□□□□ 0.2
CCNDBP1-204ENST00000563065 A8MUI8 341 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 NPIPB8E9PQR5 432 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 TNNI3P19429 210 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 TRA2BP62995 288 aaKnown RBP16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 RPL38P63173 70 aaKnown RBP16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 PRSS53Q2L4Q9 553 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 FCRLBQ6BAA4 426 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 OR52E8Q6IFG1 317 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 TCTN3Q6NUS6 607 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 PTRH1Q86Y79 214 aaKnown RBP16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 ZNF321PQ8N8H1 164 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 M1APQ8TC57 530 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 EGLN2Q96KS0 407 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 SLC25A18Q9H1K4 315 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 ADAP2Q9NPF8 381 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 THAP1Q9NVV9 213 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 HAO1Q9UJM8 370 aa16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 PCDHGA9Q9Y5G4 932 aaKnown RBP16.3■□□□□ 0.2
CCNDBP1-204ENST00000563065 C17orf105B2RV13 164 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 HRKO00198 91 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 MAN1A2O60476 641 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 GUCY1B2O75343 617 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 KITP10721 976 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 ICAM2P13598 275 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 PTGER1P34995 402 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 PGDP52209 483 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 DUSP2Q05923 314 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 SERTAD2Q14140 314 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 EXT1Q16394 746 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 LACTB2Q53H82 288 aaPredicted RBP16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 ATG16L1Q676U5 607 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 SLC48A1Q6P1K1 146 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 LINC00696Q6ZRV3 163 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 ASB18Q6ZVZ8 466 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 C19orf60Q96EN9 201 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 DGAT2Q96PD7 388 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 SMAD5Q99717 465 aaKnown RBP16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 ACBD3Q9H3P7 528 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 MMP25Q9NPA2 562 aa16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 MARCOQ9UEW3 520 aaPredicted RBP16.29■□□□□ 0.2
CCNDBP1-204ENST00000563065 BAIAP2L1Q9UHR4 511 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms