RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 SYT5O00445 386 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 PRAMEF4O60810 478 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 MSH2P43246 934 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 STT3AP46977 705 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 POU4F1Q01851 419 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 PDIA2Q13087 525 aaKnown RBP15.29■□□□□ 0.04
CMTM3-205ENST00000562707 CHIT1Q13231 466 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 BIKQ13323 160 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 SNTB1Q13884 538 aaKnown RBP15.29■□□□□ 0.04
CMTM3-205ENST00000562707 CEBPEQ15744 281 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 ZNF791Q3KP31 576 aaPredicted RBP15.29■□□□□ 0.04
CMTM3-205ENST00000562707 TMEM35AQ53FP2 167 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 FBXO48Q5FWF7 155 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 PRAMEF9Q5VWM5 478 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 CHSY3Q70JA7 882 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 UBE3DQ7Z6J8 389 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 FBXW8Q8N3Y1 598 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 LIX1Q8N485 282 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 SPATA6LQ8N4H0 392 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 SLC15A4Q8N697 577 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 FBXO36Q8NEA4 188 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 PAQR8Q8TEZ7 354 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 UBE2E3Q969T4 207 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 TSPAN17Q96FV3 270 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 ART5Q96L15 291 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 PHACTR1Q9C0D0 580 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 LIME1Q9H400 295 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 ZNF358Q9NW07 568 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 CD274Q9NZQ7 290 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 CNIH4Q9P003 139 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 SPG11Q96JI7 2443 aa15.29■□□□□ 0.04
CMTM3-205ENST00000562707 RTCAO00442 366 aaKnown RBP15.28■□□□□ 0.04
CMTM3-205ENST00000562707 DVL2O14641 736 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 CCNT2O60583 730 aaKnown RBP15.28■□□□□ 0.04
CMTM3-205ENST00000562707 S100BP04271 92 aaPredicted RBP15.28■□□□□ 0.04
CMTM3-205ENST00000562707 CCDC166P0CW27 439 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 HIST1H1TP22492 207 aaPredicted RBP15.28■□□□□ 0.04
CMTM3-205ENST00000562707 DGKQP52824 942 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 ATP6V0D1P61421 351 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 TBCCQ15814 346 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 PRAMEF20Q5VT98 475 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 ZNF793Q6ZN11 406 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 OR4N5Q8IXE1 308 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 ULK2Q8IYT8 1036 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 DND1Q8IYX4 353 aaKnown RBP15.28■□□□□ 0.04
CMTM3-205ENST00000562707 FAM13CQ8NE31 585 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 JSRP1Q96MG2 331 aaPredicted RBP15.28■□□□□ 0.04
CMTM3-205ENST00000562707 MS4A8Q9BY19 250 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 ZNF703Q9H7S9 590 aaPredicted RBP15.28■□□□□ 0.04
CMTM3-205ENST00000562707 ACKR4Q9NPB9 350 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 RYDENQ9NUL5 291 aaKnown RBP15.28■□□□□ 0.04
CMTM3-205ENST00000562707 MS4A12Q9NXJ0 267 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 QPCTLQ9NXS2 382 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 CRIM1Q9NZV1 1036 aa15.28■□□□□ 0.04
CMTM3-205ENST00000562707 IQANK1A0A1B0GTG1 560 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 TGFB1P01137 390 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 RFPL3SP0C7P2 107 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 PCNAP12004 261 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 CD22P20273 847 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 ENDOUP21128 410 aaKnown RBP15.27■□□□□ 0.04
CMTM3-205ENST00000562707 SERPINB3P29508 390 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 SSR2P43308 183 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 PLIN5Q00G26 463 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 DR1Q01658 176 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 SLAMF1Q13291 335 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 SLC29A4Q7RTT9 530 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 C9orf40Q8IXQ3 194 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 KLHL7Q8IXQ5 586 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 LRRC25Q8N386 305 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-205ENST00000562707 NEIL3Q8TAT5 605 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 ZNF473Q8WTR7 871 aaKnown RBP15.27■□□□□ 0.04
CMTM3-205ENST00000562707 FAM222BQ8WU58 562 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 PPWD1Q96BP3 646 aaKnown RBP15.27■□□□□ 0.04
CMTM3-205ENST00000562707 SPACA9Q96E40 222 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-205ENST00000562707 CMTM7Q96FZ5 175 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 SLC6A15Q9H2J7 730 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 RPF2Q9H7B2 306 aaKnown RBP15.27■□□□□ 0.04
CMTM3-205ENST00000562707 SH2D2AQ9NP31 389 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 TXNDC16Q9P2K2 825 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 PTBP2Q9UKA9 531 aaKnown RBP15.27■□□□□ 0.04
CMTM3-205ENST00000562707 PLEKHA6Q9Y2H5 1048 aa15.27■□□□□ 0.04
CMTM3-205ENST00000562707 MTO1Q9Y2Z2 717 aaKnown RBP15.27■□□□□ 0.04
CMTM3-205ENST00000562707 HCFC1P51610 2035 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 A6NNC1 897 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 AHRRA9YTQ3 701 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 PROM1O43490 865 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 FGF17O60258 216 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 SH3BGRLO75368 114 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 SCELO95171 688 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 IGKV3-11P04433 115 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 HOXB4P17483 251 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-205ENST00000562707 SERPINB1P30740 379 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 TLX1P31314 330 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-205ENST00000562707 CASP2P42575 452 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 TRPC1P48995 793 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 ASCL1P50553 236 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 IGLV3-21P80748 117 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-205ENST00000562707 FLYWCH1Q4VC44 716 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 FBXW10Q5XX13 1052 aa15.26■□□□□ 0.03
CMTM3-205ENST00000562707 OR4C11Q6IEV9 310 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms