RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 TAF8Q7Z7C8 310 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 NUDT13Q86X67 352 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 EPHX4Q8IUS5 362 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 C1orf210Q8IVY1 113 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 RBM12BQ8IXT5 1001 aaKnown RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 Q8N3U1 123 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 ZCCHC7Q8N3Z6 543 aaKnown RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 FAM86B1Q8N7N1 296 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 PRSS33Q8NF86 280 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 OR2L5Q8NG80 312 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 CDC26Q8NHZ8 85 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 PSMA8Q8TAA3 256 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 BAHD1Q8TBE0 780 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 NETO1Q8TDF5 533 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 KLHL6Q8WZ60 621 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 SNX19Q92543 992 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 ATOH1Q92858 354 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 PPCDCQ96CD2 204 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 NAF1Q96HR8 494 aaKnown RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 LRGUKQ96M69 825 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 NSMCE2Q96MF7 247 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 HSPA12BQ96MM6 686 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 FCRL4Q96PJ5 515 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 GBP5Q96PP8 586 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 PANX1Q96RD7 426 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 PRPF18Q99633 342 aaKnown RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF184Q99676 751 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 MDFIQ99750 246 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 THUMPD3Q9BV44 507 aaKnown RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 KLHL4Q9C0H6 718 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 TPT1P8Q9HAU6 139 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 PRMT8Q9NR22 394 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 AGPAT4Q9NRZ5 378 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 SIRT3Q9NTG7 399 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 DCAF13Q9NV06 445 aaKnown RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 TEX10Q9NXF1 929 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 SH3BP4Q9P0V3 963 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF639Q9UID6 485 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 CES1P1Q9UKY3 287 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 CNOT11Q9UKZ1 510 aaKnown RBP6.19□□□□□ -1.42
CAPN3-210ENST00000561817 PCDHGB3Q9Y5G1 929 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 ENTPD2Q9Y5L3 495 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 SNX11Q9Y5W9 270 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 R4GN57 208 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 DNAH14Q0VDD8 3507 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 TMEM131Q92545 1883 aa6.19□□□□□ -1.42
CAPN3-210ENST00000561817 GOLGA4Q13439 2230 aaKnown RBP6.18□□□□□ -1.42
CAPN3-210ENST00000561817 CACNA1EQ15878 2313 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 LOC105369274A0A096LPK9 316 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 A0A0G2JN53 185 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 LOC102723532A0A0G2JNH3 316 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 A0A0J9YY10 115 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 A0A1W2PR48 441 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 OR5K3A6NET4 321 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 LILRA5A6NI73 299 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 WASHC1A8K0Z3 465 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 LMO7DNF2Z398 122 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 H0YJX3 145 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 DLGAP1O14490 977 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 ACOX3O15254 700 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 HNRNPRO43390 633 aaKnown RBP6.18□□□□□ -1.42
CAPN3-210ENST00000561817 HCRTR1O43613 425 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 CPNE3O75131 537 aaKnown RBP6.18□□□□□ -1.42
CAPN3-210ENST00000561817 CREG1O75629 220 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 EPN2O95208 641 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 SEMG1P04279 462 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 FAM58BPP0C7Q3 252 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 GIMD1P0DJR0 217 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 CTSEP14091 401 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 DRD2P14416 443 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 PVRP15151 417 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 MAGP20916 626 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 HIST1H1TP22492 207 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-210ENST00000561817 PPIBP23284 216 aaKnown RBP6.18□□□□□ -1.42
CAPN3-210ENST00000561817 GRK3P35626 688 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 TSFMP43897 325 aaKnown RBP6.18□□□□□ -1.42
CAPN3-210ENST00000561817 STT3AP46977 705 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 GIPRP48546 466 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 CCT8P50990 548 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 PLA2G16P53816 162 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 AQP4P55087 323 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 MAZP56270 477 aaKnown RBP6.18□□□□□ -1.42
CAPN3-210ENST00000561817 PSMA6P60900 246 aaKnown RBP6.18□□□□□ -1.42
CAPN3-210ENST00000561817 SRSF5Q13243 272 aaKnown RBP6.18□□□□□ -1.42
CAPN3-210ENST00000561817 ELOCQ15369 112 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 SHBQ15464 509 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 RGNQ15493 299 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 CEBPEQ15744 281 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 ATP6AP1Q15904 470 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 CYP51A1Q16850 503 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 VMACQ2NL98 169 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 MINDY4Q4G0A6 757 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 IQCCQ4KMZ1 466 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 AASDHQ4L235 1098 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-210ENST00000561817 FRMPD2BQ6IN97 320 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 ENPP6Q6UWR7 440 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 CCDC81Q6ZN84 652 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 ZNF621Q6ZSS3 439 aa6.18□□□□□ -1.42
CAPN3-210ENST00000561817 CEP68Q76N32 757 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms