RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 UBE2E3Q969T4 207 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 TMEM125Q96AQ2 219 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 TMEM159Q96B96 161 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 TESCQ96BS2 214 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 INTS12Q96CB8 462 aaKnown RBP6.88□□□□□ -1.31
MARK3-212ENST00000558223 NSMCE2Q96MF7 247 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 C5orf34Q96MH7 638 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 KLHL32Q96NJ5 620 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 ACOX2Q99424 681 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 CDCA3Q99618 268 aaPredicted RBP6.88□□□□□ -1.31
MARK3-212ENST00000558223 CGREF1Q99674 301 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 PKP2Q99959 881 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 SPXQ9BT56 116 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 SPATA16Q9BXB7 569 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 MRPS26Q9BYN8 205 aaKnown RBP6.88□□□□□ -1.31
MARK3-212ENST00000558223 KCNH6Q9H252 994 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 SERHL2Q9H4I8 314 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 EBF3Q9H4W6 596 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 NSUN3Q9H649 340 aaKnown RBP6.88□□□□□ -1.31
MARK3-212ENST00000558223 ZNF696Q9H7X3 374 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 GORASP2Q9H8Y8 452 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 VCX3AQ9NNX9 186 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 TUBA8Q9NY65 449 aaPredicted RBP6.88□□□□□ -1.31
MARK3-212ENST00000558223 DNAJB11Q9UBS4 358 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 EBF1Q9UH73 591 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 ANAPC2Q9UJX6 822 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 ZNF225Q9UK10 706 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 IKZF3Q9UKT9 509 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 ZNF490Q9ULM2 529 aaPredicted RBP6.88□□□□□ -1.31
MARK3-212ENST00000558223 BTRCQ9Y297 605 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 WBP11Q9Y2W2 641 aaKnown RBP6.88□□□□□ -1.31
MARK3-212ENST00000558223 U3KQE9 123 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 TET1Q8NFU7 2136 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 ANKRD36A6QL64 1941 aa6.88□□□□□ -1.31
MARK3-212ENST00000558223 KIAA1671Q9BY89 1806 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 EDDM13A0A1B0GTR0 161 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 DPPA5A6NC42 116 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 IQCF5A8MTL0 148 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 LOC730098B7Z3J9 87 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 PPP6CO00743 305 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 NME4O00746 187 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 PGRMC2O15173 223 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 VEGFDO43915 354 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 MOSPD3O75425 235 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 RECQL5O94762 991 aaPredicted RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 PRAMEF12O95522 483 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 LDLRP01130 860 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 CFIP05156 583 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 TPOP07202 933 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 C1SP09871 688 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 PABPC4LP0CB38 370 aaKnown RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 CDH1P12830 882 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 RPS2P15880 293 aaKnown RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 ZNF26P17031 533 aaPredicted RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 TCN1P20061 433 aaPredicted RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 CCR7P32248 378 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 S100A3P33764 101 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 TTKP33981 857 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 SLC6A12P48065 614 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 TRPC1P48995 793 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 GSK3BP49841 420 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 NME5P56597 212 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 OLR1P78380 273 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 PHEXP78562 749 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 CHRNB3Q05901 458 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 DPTQ07507 201 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 RPA4Q13156 261 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 CYP51A1Q16850 503 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 BCL7AQ4VC05 210 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 PAGE2BQ5JRK9 111 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 C6orf10Q5SRN2 563 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 HENMT1Q5T8I9 393 aaKnown RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 FAM46CQ5VWP2 391 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 NANOGP8Q6NSW7 305 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 CDC73Q6P1J9 531 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 ERICH5Q6P6B1 374 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 UGT2A3Q6UWM9 527 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 LAYNQ6UX15 382 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 PRR23CQ6ZRP0 262 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 RPS27LQ71UM5 84 aaKnown RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 RRM2BQ7LG56 351 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 TECPR1Q7Z6L1 1165 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 EID3Q8N140 333 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 TMEM132CQ8N3T6 1108 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 CLDN19Q8N6F1 224 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 OR52B6Q8NGF0 335 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 OR9I1Q8NGQ6 314 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 FBXO30Q8TB52 745 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 HM13Q8TCT9 377 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 KCNE4Q8WWG9 221 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 SELENOMQ8WWX9 145 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 OR8D1Q8WZ84 308 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 ELMO1Q92556 727 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 CXorf40BQ96DE9 158 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 DGCR14Q96DF8 476 aaKnown RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 ITCHQ96J02 903 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 RPL10LQ96L21 214 aaKnown RBP6.87□□□□□ -1.31
MARK3-212ENST00000558223 KCNA7Q96RP8 456 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 TSC22D3Q99576 134 aa6.87□□□□□ -1.31
MARK3-212ENST00000558223 CCM2Q9BSQ5 444 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms