RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 TRIM23P36406 574 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 NR0B1P51843 470 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 TEAD2Q15562 447 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 RAB11BQ15907 218 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 HSF5Q4G112 596 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 UBXN11Q5T124 520 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 LGI4Q8N135 537 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 OR52E4Q8NGH9 312 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ZFAND1Q8TCF1 268 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 CTPS2Q9NRF8 586 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 IMP3Q9NV31 184 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 ASF1BQ9NVP2 202 aa3.55□□□□□ -1.84
ATXN3-248ENST00000558190 EIF4G1Q04637 1599 aaKnown RBP3.55□□□□□ -1.84
ATXN3-248ENST00000558190 HTR3BO95264 441 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 HLA-FP30511 346 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SHMT2P34897 504 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 CRY2Q49AN0 593 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TMEM88Q6PEY1 159 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SERPINA13PQ6UXR4 307 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 CLDN19Q8N6F1 224 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 NLGN2Q8NFZ4 835 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 PBDC1Q9BVG4 233 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 PCDHGA1Q9Y5H4 931 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 NCR1O76036 304 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 MMP10P09238 476 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ARHGAP11AQ6P4F7 1023 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SERPINA9Q86WD7 417 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 HASPINQ8TF76 798 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 NUDT8Q8WV74 236 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 MAL2Q969L2 176 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ZFR2Q9UPR6 939 aaKnown RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SLC22A23A1A5C7 686 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 GPR25O00155 361 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 FLRT2O43155 660 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 MAFO75444 373 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 RPS14P62263 151 aaKnown RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TRAM2Q15035 370 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF697Q5TEC3 545 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 BTBD2Q9BX70 525 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 GPR88Q9GZN0 384 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TCEAL2Q9H3H9 227 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF282Q9UDV7 671 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SDC3O75056 442 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 LALBAP00709 142 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 CASP7P55210 303 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 NDUFA9Q16795 377 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 C4orf17Q53FE4 359 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 FAM122BQ7Z309 247 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 MRPL41Q8IXM3 137 aaKnown RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 CMTM7Q96FZ5 175 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SLC25A44Q96H78 314 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TXNDC15Q96J42 360 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 FAM86C1Q9NVL1 165 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 LSM7Q9UK45 103 aaKnown RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 FBXW2Q9UKT8 454 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 NOS1P29475 1434 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ALDOAP04075 364 aaKnown RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 CRYBA1P05813 215 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TUSC1Q2TAM9 212 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TREML2Q5T2D2 321 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 BAGE3Q86Y29 109 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 BAGE2Q86Y30 109 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ZNF439Q8NDP4 499 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ZMIZ2Q8NF64 920 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 CERKQ8TCT0 537 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ARL11Q969Q4 196 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ELMOD3Q96FG2 381 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 DHRS4Q9BTZ2 278 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 HSBP1L1C9JCN9 74 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 OR13C7P0DN81 318 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 PROZP22891 400 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TAS2R50P59544 299 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 NKPD1Q17RQ9 610 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 CST9LP1Q5W188 147 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 GLT8D1Q68CQ7 371 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ABHD15Q6UXT9 468 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SLC38A6Q8IZM9 456 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ACBD7Q8N6N7 88 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 DHRS9Q9BPW9 319 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 OSGIN1Q9UJX0 560 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 NOP16Q9Y3C1 178 aaKnown RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 PPP1R2P9O14990 202 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 HPRP00739 348 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TAF10Q12962 218 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 P2RY14Q15391 338 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 SLC39A4Q6P5W5 647 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 IL17RCQ8NAC3 791 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 OR6J1Q8NGC5 347 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 RSC1A1Q92681 617 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 FKBP10Q96AY3 582 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 DPH2Q9BQC3 489 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TM7SF3Q9NS93 570 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 LATS1O95835 1130 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 ALPLP05186 524 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 GRK6P43250 576 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 FABP6P51161 128 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 AIF1P55008 147 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 TAF1AQ15573 450 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-248ENST00000558190 FAM111BQ6SJ93 734 aa3.54□□□□□ -1.84
ATXN3-248ENST00000558190 METAP1DQ6UB28 335 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms