RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 UBOX5O94941 541 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 ANP32DO95626 131 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 GPR75O95800 540 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 IGHEP01854 428 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 GALNSP34059 522 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 RORAP35398 523 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 MAGEA8P43361 318 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 XCR1P46094 333 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 MANFP55145 182 aaKnown RBP11.69□□□□□ -0.54
TPM1-209ENST00000558072 TXNL4AP83876 142 aaKnown RBP11.69□□□□□ -0.54
TPM1-209ENST00000558072 SHC2P98077 582 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 STX4Q12846 297 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 PUM1Q14671 1186 aaKnown RBP eCLIP11.69□□□□□ -0.54
TPM1-209ENST00000558072 UGT8Q16880 541 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 SPATS1Q496A3 300 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 VPS26BQ4G0F5 336 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 LACTB2Q53H82 288 aaPredicted RBP11.69□□□□□ -0.54
TPM1-209ENST00000558072 SPANXN4Q5MJ08 99 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 C6orf15Q6UXA7 325 aaPredicted RBP11.69□□□□□ -0.54
TPM1-209ENST00000558072 QSOX2Q6ZRP7 698 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 OR9I1Q8NGQ6 314 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 DNAJB14Q8TBM8 379 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 GFM2Q969S9 779 aaKnown RBP11.69□□□□□ -0.54
TPM1-209ENST00000558072 MIEF2Q96C03 454 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 CCDC115Q96NT0 180 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 RAD21L1Q9H4I0 556 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 PRTFDC1Q9NRG1 225 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 TEX10Q9NXF1 929 aaPredicted RBP11.69□□□□□ -0.54
TPM1-209ENST00000558072 KLK13Q9UKR3 277 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 MAN2B2Q9Y2E5 1009 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 TMEM184BQ9Y519 407 aaPredicted RBP11.69□□□□□ -0.54
TPM1-209ENST00000558072 CEP250Q9BV73 2442 aa11.69□□□□□ -0.54
TPM1-209ENST00000558072 A0A096LPI6 279 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 ZNF860A6NHJ4 632 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 ERAL1O75616 437 aaKnown RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 BCAS2O75934 225 aaPredicted RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 STK17BO94768 372 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 NTRK1P04629 796 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 RAB40ALP0C0E4 278 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 ZCCHC18P0CG32 403 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 PORP16435 677 aaPredicted RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 IL12AP29459 219 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 FRKP42685 505 aaPredicted RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 ANXA11P50995 505 aaKnown RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 PLIN5Q00G26 463 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 SLC13A2Q13183 592 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 NFYCQ13952 458 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 CEBPEQ15744 281 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 TRMT5Q32P41 509 aaKnown RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 TIGD2Q4W5G0 525 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 C6orf10Q5SRN2 563 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 GK5Q6ZS86 529 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 PRSS41Q7RTY9 318 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 TREML1Q86YW5 311 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 LRRC25Q8N386 305 aaPredicted RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 METTL27Q8N6F8 245 aaPredicted RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 AMER3Q8N944 861 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 PLPP5Q8NEB5 264 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 OR7A2PQ8NGA2 310 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 METTL21AQ8WXB1 218 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 NACC2Q96BF6 587 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 RBM18Q96H35 190 aaKnown RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 PEX11GQ96HA9 241 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 TEX37Q96LM6 180 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 PANX1Q96RD7 426 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 EFHD1Q9BUP0 239 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 MMADHCQ9H3L0 296 aaPredicted RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 C3orf14Q9HBI5 128 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 ARL8BQ9NVJ2 186 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 TAS2R9Q9NYW1 312 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 HCN3Q9P1Z3 774 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 C19orf25Q9UFG5 118 aaPredicted RBP11.68□□□□□ -0.54
TPM1-209ENST00000558072 CES1P1Q9UKY3 287 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 VPS4AQ9UN37 437 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 SATB2Q9UPW6 733 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 B3GALT1Q9Y5Z6 326 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 MAU2Q9Y6X3 613 aa11.68□□□□□ -0.54
TPM1-209ENST00000558072 EVPLLA8MZ36 301 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 MYO1GB0I1T2 1018 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 B2RBV5 119 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 STMND1H3BQB6 276 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 AIM2O14862 343 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 GYG2O15488 501 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 DNAJA2O60884 412 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 TNFSF15O95150 251 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 CBX6O95503 412 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 KRT75O95678 551 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 SLC35E2P0CK97 266 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 LAMP1P11279 417 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 PTPN4P29074 926 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 GPC1P35052 558 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 OR1D4P47884 311 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 NUDT2P50583 147 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 XKP51811 444 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 PCBP4P57723 403 aaKnown RBP11.67□□□□□ -0.54
TPM1-209ENST00000558072 RPS15P62841 145 aaKnown RBP11.67□□□□□ -0.54
TPM1-209ENST00000558072 OLR1P78380 273 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 PRR5P85299 388 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 MC1RQ01726 317 aa11.67□□□□□ -0.54
TPM1-209ENST00000558072 TLR1Q15399 786 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms