RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 TANKQ92844 425 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 DAZLQ92904 295 aaKnown RBP8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 ATP6V1E2Q96A05 226 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 MTFMTQ96DP5 389 aaKnown RBP8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 MTBPQ96DY7 904 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 C5orf34Q96MH7 638 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 CENPKQ9BS16 269 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 DDX31Q9H8H2 851 aaKnown RBP8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 L2HGDHQ9H9P8 463 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 LIN28AQ9H9Z2 209 aaKnown RBP8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 PRM3Q9NNZ6 103 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 MS4A12Q9NXJ0 267 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 TMEM216Q9P0N5 145 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 PLEKHB1Q9UF11 243 aaPredicted RBP8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 FETUBQ9UGM5 382 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF225Q9UK10 706 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 CLCA3PQ9Y6N3 262 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 SPACA6W5XKT8 324 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 TEX15Q9BXT5 2789 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 NCOA6Q14686 2063 aaPredicted RBP8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 CACNA1CQ13936 2221 aa8.17□□□□□ -1.1
SNRPA1-206ENST00000558059 A0A1W2PR48 441 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 A1L4Q6 167 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 C17orf105B2RV13 164 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 FCHO1O14526 889 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 LRRTM2O43300 516 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 NME2P1O60361 137 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 PRKRAO75569 313 aaKnown RBP8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 ITGA10O75578 1167 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 SLC25A12O75746 678 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 SEMA3DO95025 777 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 UNC5CO95185 931 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 CLDN1O95832 211 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 TSPAN8P19075 237 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 NME2P22392 152 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 HSD17B3P37058 310 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 CDH13P55290 713 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 PHEXP78562 749 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 TNFRSF17Q02223 184 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 MAPKAPK3Q16644 382 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 GGTA1PQ4G0N0 100 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 UNC50Q53HI1 259 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 RNFT1Q5M7Z0 435 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 FAM219BQ5XKK7 198 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 FRG2Q64ET8 278 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 LETMD1Q6P1Q0 360 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 DGAT2L6Q6ZPD8 337 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 MILR1Q7Z6M3 343 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 SIAH3Q8IW03 269 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 EIF1ADQ8N9N8 165 aaKnown RBP8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 TMEM178AQ8NBL3 297 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 OR4F6Q8NGB9 312 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 SLC2A12Q8TD20 617 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF721Q8TF20 911 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 MZB1Q8WU39 189 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 UCN3Q969E3 161 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 RELTQ969Z4 430 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 FRMD6Q96NE9 622 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 FRG2BQ96QU4 278 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 SERPINI1Q99574 410 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 CCDC77Q9BR77 488 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 OR8D2Q9GZM6 311 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 RPF2Q9H7B2 306 aaKnown RBP8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 SEMA4BQ9NPR2 832 aaPredicted RBP8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 PSMC3IPQ9P2W1 217 aaPredicted RBP8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 SEC14L3Q9UDX4 400 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 PHF11Q9UIL8 331 aa8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 YARS2Q9Y2Z4 477 aaKnown RBP8.16□□□□□ -1.1
SNRPA1-206ENST00000558059 IQANK1A0A1B0GTG1 560 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 GOLGA8RI6L899 631 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 HRKO00198 91 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 DLX3O60479 287 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF354AO60765 605 aaPredicted RBP8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 OR2J2O76002 312 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 GPR75O95800 540 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 OTCP00480 354 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 GBAP04062 536 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 SHBGP04278 402 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 IGKV3-11P04433 115 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 FAM58BPP0C7Q3 252 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 TNNI3P19429 210 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 TLX1P31314 330 aaPredicted RBP8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 ARL1P40616 181 aaPredicted RBP8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 STT3AP46977 705 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 SSR4P51571 173 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 HK2P52789 917 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 HERVK_113P63132 956 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 RNF4P78317 190 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 ALDH6A1Q02252 535 aaKnown RBP8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 FOLH1Q04609 750 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 IFT88Q13099 833 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 BIKQ13323 160 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 KRTCAP3Q53RY4 240 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 SGO1Q5FBB7 561 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF678Q5SXM1 525 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 TEX35Q5T0J7 233 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 C10orf62Q5T681 223 aaPredicted RBP8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 C1QL3Q5VWW1 255 aa8.15□□□□□ -1.1
SNRPA1-206ENST00000558059 CYP20A1Q6UW02 462 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms