RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TM9SF4Q92544 642 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 TM4SF18Q96CE8 201 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 C19orf60Q96EN9 201 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 APIPQ96GX9 242 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 C7orf26Q96N11 449 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 LMF1Q96S06 567 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 HBEGFQ99075 208 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 SORT1Q99523 831 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 SMAD5Q99717 465 aaKnown RBP12.83□□□□□ -0.36
SHMT2-234ENST00000557703 TUBB1Q9H4B7 451 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 MYNNQ9NPC7 610 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.83□□□□□ -0.366e-6■■□□□ 12.1
SHMT2-234ENST00000557703 GPR83Q9NYM4 423 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 ZNF451Q9Y4E5 1061 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 CLCA3PQ9Y6N3 262 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 COL6A6A6NMZ7 2263 aa12.83□□□□□ -0.36
SHMT2-234ENST00000557703 PIP5K1BO14986 540 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 HDAC3O15379 428 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 ITM2AO43736 263 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 LYPLA1O75608 230 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-234ENST00000557703 SLITRK5O94991 958 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 TGDSO95455 350 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 AIFM1O95831 613 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 LINC00032P0C843 101 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 PRR35P0CG20 571 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 PRPS2P11908 318 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 CHN1P15882 459 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 MAOAP21397 527 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 STT3AP46977 705 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 TAS2R50P59544 299 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 OCRLQ01968 901 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 KCNAB2Q13303 367 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 LINC00303Q3SY05 128 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 AGAP7PQ5VUJ5 663 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 H3F3CQ6NXT2 135 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 SLC48A1Q6P1K1 146 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 CRLF3Q8IUI8 442 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 ZNF781Q8N8C0 355 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 OR8K3Q8NH51 312 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.82□□□□□ -0.36
SHMT2-234ENST00000557703 PIWIL2Q8TC59 973 aaKnown RBP12.82□□□□□ -0.36
SHMT2-234ENST00000557703 ANKRD9Q96BM1 317 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-234ENST00000557703 ERP27Q96DN0 273 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 MTERF3Q96E29 417 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 AGAP4Q96P64 663 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 CSF3RQ99062 836 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 WDR77Q9BQA1 342 aaPredicted RBP12.82□□□□□ -0.36
SHMT2-234ENST00000557703 SLC25A23Q9BV35 468 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 SORBS1Q9BX66 1292 aaKnown RBP12.82□□□□□ -0.36
SHMT2-234ENST00000557703 NECTIN3Q9NQS3 549 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 GIMAP4Q9NUV9 329 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 ASIC5Q9NY37 505 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 CLDN16Q9Y5I7 305 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 IGSF10Q6WRI0 2623 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 ATMQ13315 3056 aa12.82□□□□□ -0.36
SHMT2-234ENST00000557703 DOCK10Q96BY6 2186 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 NBEAQ8NFP9 2946 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 TBX19O60806 448 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 IFI6P09912 130 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 ALOX15P16050 662 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-234ENST00000557703 CSNK2A2P19784 350 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-234ENST00000557703 DDCP20711 480 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 ITGA3P26006 1051 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 CCL11P51671 97 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 EFNA3P52797 238 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 RAE1P78406 368 aaKnown RBP12.81□□□□□ -0.36
SHMT2-234ENST00000557703 IRX1P78414 480 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-234ENST00000557703 FOLH1Q04609 750 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 EMX2Q04743 252 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 BTKQ06187 659 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 CHAF1BQ13112 559 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 CRB2Q5IJ48 1285 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 CPZQ66K79 652 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 C18orf63Q68DL7 685 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 FAAH2Q6GMR7 532 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 IGFL3Q6UXB1 125 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 LANCL3Q6ZV70 420 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 R3HCC1LQ7Z5L2 792 aaKnown RBP12.81□□□□□ -0.36
SHMT2-234ENST00000557703 TMEM151BQ8IW70 566 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 WDR75Q8IWA0 830 aaKnown RBP12.81□□□□□ -0.36
SHMT2-234ENST00000557703 ARMC10Q8N2F6 343 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 B3GNT7Q8NFL0 401 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 ELP5Q8TE02 316 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 C16orf78Q8WTQ4 265 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 STON2Q8WXE9 905 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 TSLPQ969D9 159 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 C8orf44Q96CB5 159 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 CRELD1Q96HD1 420 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 MAGEB18Q96M61 343 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 DGAT2Q96PD7 388 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 RBCK1Q9BYM8 510 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 SEMA4CQ9C0C4 833 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 C20orf27Q9GZN8 174 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 SLC25A18Q9H1K4 315 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 MEAF6Q9HAF1 191 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 ZNF160Q9HCG1 818 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 CES1P1Q9UKY3 287 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 DLGAP4Q9Y2H0 992 aa12.81□□□□□ -0.36
SHMT2-234ENST00000557703 FIS1Q9Y3D6 152 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms