RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CLDN16Q9Y5I7 305 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 CLCA3PQ9Y6N3 262 aa11.68□□□□□ -0.54
SLIRP-211ENST00000557623 CROCCQ5TZA2 2017 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 TGFBR3LH3BV60 316 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 CTIFO43310 598 aaKnown RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 DYRK3O43781 588 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 COX7A2P14406 83 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 TNNI3P19429 210 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 ALDH3A1P30838 453 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 MAPK12P53778 367 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 IGLV3-21P80748 117 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 ZNF169Q14929 603 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 PLEKHN1Q494U1 663 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 COLEC12Q5KU26 742 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 TCHHL1Q5QJ38 904 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 ACER2Q5QJU3 275 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 C18orf63Q68DL7 685 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 COMMD6Q7Z4G1 85 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 MORN4Q8NDC4 146 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 OR14A16Q8NHC5 309 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 SUN3Q8TAQ9 357 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 CPT1CQ8TCG5 803 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 ANKRD9Q96BM1 317 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 DGAT2Q96PD7 388 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 PELOQ9BRX2 385 aaKnown RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 STMN4Q9H169 189 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 SSU72Q9NP77 194 aaKnown RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 SLC17A7Q9P2U7 560 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 PPIEQ9UNP9 301 aaKnown RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 TIMM22Q9Y584 194 aa11.67□□□□□ -0.54
SLIRP-211ENST00000557623 TLN1Q9Y490 2541 aaKnown RBP11.67□□□□□ -0.54
SLIRP-211ENST00000557623 TRAV17A0A0B4J275 112 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 A0A1W2PR48 441 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 OR5H15A6NDH6 313 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 UBFD1O14562 309 aaKnown RBP11.66□□□□□ -0.54
SLIRP-211ENST00000557623 TYROBPO43914 113 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 FGF17O60258 216 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 NPHS1O60500 1241 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 AIFM1O95831 613 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 WDPCPO95876 746 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 GBAP04062 536 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 UROSP10746 265 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 TPP2P29144 1249 aaPredicted RBP11.66□□□□□ -0.54
SLIRP-211ENST00000557623 STT3AP46977 705 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 MLLT10P55197 1068 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 TRA2BP62995 288 aaKnown RBP11.66□□□□□ -0.54
SLIRP-211ENST00000557623 PLIN5Q00G26 463 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 FOLH1Q04609 750 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 GALNT1Q10472 559 aaPredicted RBP11.66□□□□□ -0.54
SLIRP-211ENST00000557623 TBL3Q12788 808 aaKnown RBP11.66□□□□□ -0.54
SLIRP-211ENST00000557623 SPIN4Q56A73 249 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 OR52E8Q6IFG1 317 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 CUZD1Q86UP6 607 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 RPS19BP1Q86WX3 136 aaKnown RBP11.66□□□□□ -0.54
SLIRP-211ENST00000557623 CRLF3Q8IUI8 442 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 Q8NA96 180 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 APCDD1LQ8NCL9 501 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 CHTF18Q8WVB6 975 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 PGM2Q96G03 612 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 RBM18Q96H35 190 aaKnown RBP11.66□□□□□ -0.54
SLIRP-211ENST00000557623 KCNA7Q96RP8 456 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 HBEGFQ99075 208 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 GATA5Q9BWX5 397 aaPredicted RBP11.66□□□□□ -0.54
SLIRP-211ENST00000557623 DEFB126Q9BYW3 111 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 TRIM4Q9C037 500 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.66□□□□□ -0.54
SLIRP-211ENST00000557623 CENPHQ9H3R5 247 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 CDCP1Q9H5V8 836 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 EML4Q9HC35 981 aaKnown RBP11.66□□□□□ -0.54
SLIRP-211ENST00000557623 PLA2G3Q9NZ20 509 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 LUZP4Q9P127 313 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 ACTL7BQ9Y614 415 aa11.66□□□□□ -0.54
SLIRP-211ENST00000557623 BOD1L1Q8NFC6 3051 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 TRBV11-1A0A0K0K1C0 115 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 C1orf226A1L170 272 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 C17orf105B2RV13 164 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 FCHO1O14526 889 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 ZFAND5O76080 213 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 GPR75O95800 540 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 ALOX15P16050 662 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-211ENST00000557623 CREB1P16220 341 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 PIK3R1P27986 724 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 GALNSP34059 522 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 SERPINB5P36952 375 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 GSTM5P46439 218 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 HTR6P50406 440 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 TNFSF10P50591 281 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 GPR143P51810 404 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 FOXA1P55317 472 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 ID2Q02363 134 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 ACSM2AQ08AH3 577 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 INPP5JQ15735 1006 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-211ENST00000557623 IMPG1Q17R60 797 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 TNFAIP8L3Q5GJ75 292 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 BEND6Q5SZJ8 279 aaPredicted RBP11.65□□□□□ -0.54
SLIRP-211ENST00000557623 NDUFAF5Q5TEU4 345 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 ACSM2BQ68CK6 577 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 FCRLBQ6BAA4 426 aa11.65□□□□□ -0.54
SLIRP-211ENST00000557623 RPUSD3Q6P087 351 aaKnown RBP11.65□□□□□ -0.54
SLIRP-211ENST00000557623 EXOC3L1Q86VI1 746 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms