RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 LCA5Q86VQ0 697 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 SLC26A11Q86WA9 606 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 LIX1LQ8IVB5 337 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 CYP4Z2PQ8N1L4 340 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 LRRC57Q8N9N7 239 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 FBXO15Q8NCQ5 510 aaPredicted RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 NFAM1Q8NET5 270 aaPredicted RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 WFDC11Q8NEX6 87 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 OR5M9Q8NGP3 310 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 OR10Q1Q8NGQ4 319 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 GIMAP7Q8NHV1 300 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 SLC13A3Q8WWT9 602 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 ASB11Q8WXH4 323 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 TM4SF19Q96DZ7 209 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 C1orf159Q96HA4 380 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 TTYH2Q9BSA4 534 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 DEFB126Q9BYW3 111 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 DEFB127Q9H1M4 99 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 CXorf56Q9H5V9 222 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 CCDC177Q9NQR7 707 aaPredicted RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 DEPPQ9NTK1 212 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 TMEM184CQ9NVA4 438 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 CRIM1Q9NZV1 1036 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 CGGBP1Q9UFW8 167 aaPredicted RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 PACSIN2Q9UNF0 486 aaPredicted RBP5.44□□□□□ -1.54
VPS33B-207ENST00000557470 SNX13Q9Y5W8 968 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 SLC22A7Q9Y694 548 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 ZANQ9Y493 2812 aa5.44□□□□□ -1.54
VPS33B-207ENST00000557470 PHF3Q92576 2039 aaKnown RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 TLN2Q9Y4G6 2542 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 IGKV3D-11A0A0A0MRZ8 115 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 A0A0G2JMM0 328 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 A0A0G2JNJ9 132 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 TRBV11-1A0A0K0K1C0 115 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 A0A1W2PPB8 328 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 A0A1W2PRS3 328 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 GRID2IPA4D2P6 1211 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 PINLYPA6NC86 204 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 A6NNC1 897 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 A8MUA0 341 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 KIR3DP1A8MWS1 328 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 KIAA1324LA8MWY0 1029 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 E5RI56 91 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 GFYI3L273 518 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 CHST10O43529 356 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 LIASO43766 372 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 GALR3O60755 368 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 TMEM127O75204 238 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 SKAP2O75563 359 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 ITGA10O75578 1167 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 BAG2O95816 211 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 TUBB4AP04350 444 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 F7P08709 466 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 SLC35G6P0C7Q6 338 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 CDH1P12830 882 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 MAOAP21397 527 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 JAK1P23458 1154 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 HRH2P25021 359 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 CNTFP26441 200 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 SSTR4P31391 388 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 STIP1P31948 543 aaKnown RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 KIR2DL3P43628 341 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 ZFP36L2P47974 494 aaKnown RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 CLCN7P51798 805 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 GTF2A1P52655 376 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 ADARP55265 1226 aaKnown RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 TBPL1P62380 186 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 PPIAP62937 165 aaKnown RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 BTG2P78543 158 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 HERC3Q15034 1050 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 RPS6KA1Q15418 735 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 OASLQ15646 514 aaKnown RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 PRSS53Q2L4Q9 553 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 DEFB134Q4QY38 66 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 TMEM198Q66K66 360 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 RTL6Q6ICC9 239 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 CAPN13Q6MZZ7 669 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 MRNIPQ6NTE8 343 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF585AQ6P3V2 769 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 PAMR1Q6UXH9 720 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 B3GNT6Q6ZMB0 384 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 TAOK1Q7L7X3 1001 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 WDR53Q7Z5U6 358 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 SDCCAG8Q86SQ7 713 aaPredicted RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 PRIMA1Q86XR5 153 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 CDC20BQ86Y33 519 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 TMEM156Q8N614 296 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 PRELID2Q8N945 189 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 TC2NQ8N9U0 490 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 CAMKVQ8NCB2 501 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 APCDD1LQ8NCL9 501 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 PSD4Q8NDX1 1056 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF740Q8NDX6 193 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 SLCO2A1Q92959 643 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 MBD6Q96DN6 1003 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 ARSGQ96EG1 525 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 FAM46AQ96IP4 442 aaKnown RBP5.43□□□□□ -1.54
VPS33B-207ENST00000557470 C18orf12Q96KH6 178 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 PTCHD1Q96NR3 888 aa5.43□□□□□ -1.54
VPS33B-207ENST00000557470 PANX2Q96RD6 677 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms