RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 POMGNT2Q8NAT1 580 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 OR4Q3Q8NH05 313 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 CASP10Q92851 521 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 NXPE2Q96DL1 559 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 LINC00615Q96LM1 132 aaPredicted RBP3.06□□□□□ -1.92
VRK1-207ENST00000557352 LINC00167Q96N53 147 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 TAAR6Q96RI8 345 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 APOL6Q9BWW8 343 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 RBM24Q9BX46 236 aaKnown RBP3.06□□□□□ -1.92
VRK1-207ENST00000557352 BOLA2Q9H3K6 86 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 CLEC5AQ9NY25 188 aa3.06□□□□□ -1.92
VRK1-207ENST00000557352 MAGED1Q9Y5V3 778 aaPredicted RBP3.06□□□□□ -1.92
VRK1-207ENST00000557352 MYH7BA7E2Y1 1941 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 PHIPQ8WWQ0 1821 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 NID2Q14112 1375 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 C17orf105B2RV13 164 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 E9PAM4 449 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 ZNF749O43361 778 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 TXNL1O43396 289 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 MMP10P09238 476 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 FAM200BP0CF97 657 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 HSPD1P10809 573 aaKnown RBP3.05□□□□□ -1.92
VRK1-207ENST00000557352 PSMA5P28066 241 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 ADORA1P30542 326 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 RIDAP52758 137 aaKnown RBP3.05□□□□□ -1.92
VRK1-207ENST00000557352 UBASH3AP57075 661 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 EVCP57679 992 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 FKBP1AP62942 108 aaKnown RBP3.05□□□□□ -1.92
VRK1-207ENST00000557352 RUNX3Q13761 415 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 TOMM20Q15388 145 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 MLF2Q15773 248 aaPredicted RBP3.05□□□□□ -1.92
VRK1-207ENST00000557352 PTGISQ16647 500 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 Q1RN00 199 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 RSBN1Q5VWQ0 802 aaPredicted RBP3.05□□□□□ -1.92
VRK1-207ENST00000557352 CWC27Q6UX04 472 aaKnown RBP3.05□□□□□ -1.92
VRK1-207ENST00000557352 TMUB2Q71RG4 321 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 PRPF39Q86UA1 669 aaKnown RBP3.05□□□□□ -1.92
VRK1-207ENST00000557352 HSCBQ8IWL3 235 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 MAML2Q8IZL2 1156 aaPredicted RBP3.05□□□□□ -1.92
VRK1-207ENST00000557352 ANKRD13CQ8N6S4 541 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 PGM2Q96G03 612 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 RIMS4Q9H426 269 aaPredicted RBP3.05□□□□□ -1.92
VRK1-207ENST00000557352 CTNNA3Q9UI47 895 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 ATP6V0A2Q9Y487 856 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 DOCK1Q14185 1865 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 PAPPA2Q9BXP8 1791 aa3.05□□□□□ -1.92
VRK1-207ENST00000557352 ROBO3Q96MS0 1386 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 A8MVM7 634 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 GPAA1O43292 621 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 TNFSF12O43508 249 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 NR2F1P10589 423 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 AKR1B1P15121 316 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 EEF1B2P24534 225 aaKnown RBP3.04□□□□□ -1.92
VRK1-207ENST00000557352 DUTP33316 252 aaKnown RBP3.04□□□□□ -1.92
VRK1-207ENST00000557352 ELK3P41970 407 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 RAD52P43351 418 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 IFI35P80217 286 aaPredicted RBP3.04□□□□□ -1.92
VRK1-207ENST00000557352 CACNG1Q06432 222 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 RALGDSQ12967 914 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 SNTB1Q13884 538 aaKnown RBP3.04□□□□□ -1.92
VRK1-207ENST00000557352 RFTN1Q14699 578 aaPredicted RBP3.04□□□□□ -1.92
VRK1-207ENST00000557352 LACTB2Q53H82 288 aaPredicted RBP3.04□□□□□ -1.92
VRK1-207ENST00000557352 NAA16Q6N069 864 aaPredicted RBP3.04□□□□□ -1.92
VRK1-207ENST00000557352 RUFY3Q7L099 469 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 RPAINQ86UA6 219 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 ZNF589Q86UQ0 364 aaPredicted RBP3.04□□□□□ -1.92
VRK1-207ENST00000557352 IQCHQ86VS3 1027 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 OR5M9Q8NGP3 310 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 SECISBP2LQ93073 1101 aaKnown RBP3.04□□□□□ -1.92
VRK1-207ENST00000557352 B3GALT6Q96L58 329 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 LRRC3BQ96PB8 259 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 IL12RB2Q99665 862 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 SLF1Q9BQI6 1058 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 COA1Q9GZY4 146 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 RNF121Q9H920 327 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 NKIRAS2Q9NYR9 191 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 ABCD2Q9UBJ2 740 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 TRPV2Q9Y5S1 764 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 TRPM7Q96QT4 1865 aa3.04□□□□□ -1.92
VRK1-207ENST00000557352 COL4A4P53420 1690 aaPredicted RBP3.04□□□□□ -1.92
VRK1-207ENST00000557352 MYH11P35749 1972 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 KIAA1217Q5T5P2 1943 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 ZNFX1Q9P2E3 1918 aaKnown RBP3.03□□□□□ -1.92
VRK1-207ENST00000557352 GOLGB1Q14789 3259 aaKnown RBP3.03□□□□□ -1.92
VRK1-207ENST00000557352 LOC285556D6RIA3 1793 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 GAKO14976 1311 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 MYO3BQ8WXR4 1341 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 ZNF532Q9HCE3 1301 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 TRGV8A0A0C4DH27 118 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 FAM168BA1KXE4 195 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 NKX6-3A6NJ46 265 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 HAT1O14929 419 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 CELF2O95319 508 aaKnown RBP3.03□□□□□ -1.92
VRK1-207ENST00000557352 LY6G6DO95868 133 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 MT-ND1P03886 318 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 YES1P07947 543 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 ZNF19P17023 458 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 GSTO1P78417 241 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 ACSM1Q08AH1 577 aa3.03□□□□□ -1.92
VRK1-207ENST00000557352 ALCAMQ13740 583 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms