RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TRIM40Q6P9F5 258 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 PRSS57Q6UWY2 283 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 LMNTD2Q8IXW0 634 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 TXLNBQ8N3L3 684 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 PAQR8Q8TEZ7 354 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 ISL2Q96A47 359 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 MS4A6EQ96DS6 147 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 ZNF597Q96LX8 424 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 PIP5K1AQ99755 562 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 WDR83Q9BRX9 315 aaKnown RBP12.79□□□□□ -0.36
ACTN1-219ENST00000556432 GALNT8Q9NY28 637 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 SLC22A14Q9Y267 594 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 KCNE2Q9Y6J6 123 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 CAPN6Q9Y6Q1 641 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 NCKAP5O14513 1909 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 KIAA1549Q9HCM3 1950 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 LRIT2A6NDA9 550 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 CYR61O00622 381 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 DYRK3O43781 588 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 LDB3O75112 727 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 ETHE1O95571 254 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 TMIGD3P0DMS9 266 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-219ENST00000556432 MTTPP55157 894 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 TIAL1Q01085 375 aaKnown RBP eCLIP12.78□□□□□ -0.36
ACTN1-219ENST00000556432 GPS1Q13098 491 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 SERTAD2Q14140 314 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 RBM20Q5T481 1227 aaKnown RBP12.78□□□□□ -0.36
ACTN1-219ENST00000556432 ANKRD22Q5VYY1 191 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 ADGRD1Q6QNK2 874 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 CAND1Q86VP6 1230 aaKnown RBP12.78□□□□□ -0.36
ACTN1-219ENST00000556432 TTLQ8NG68 377 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 OR10G3Q8NGC4 313 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 GAL3ST4Q96RP7 486 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 SERINC2Q96SA4 455 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 REXO4Q9GZR2 422 aaKnown RBP12.78□□□□□ -0.36
ACTN1-219ENST00000556432 TSPY26PQ9H489 355 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 SH2D2AQ9NP31 389 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 CNIH4Q9P003 139 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 NDRG3Q9UGV2 375 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 SLC6A5Q9Y345 797 aa12.78□□□□□ -0.36
ACTN1-219ENST00000556432 CD8B2A6NJW9 211 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 CRLF1O75462 422 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 IL18BPO95998 194 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 HPDP32754 393 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-219ENST00000556432 RPL21P46778 160 aaKnown RBP12.77□□□□□ -0.37
ACTN1-219ENST00000556432 MASP1P48740 699 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 RCAN2Q14206 197 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 SLBPQ14493 270 aaKnown RBP eCLIP12.77□□□□□ -0.37
ACTN1-219ENST00000556432 DRICH1Q6PGQ1 229 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-219ENST00000556432 TMIGD1Q6UXZ0 262 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 OR2L5Q8NG80 312 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 NUBPLQ8TB37 319 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 ZNF721Q8TF20 911 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 QRFPRQ96P65 431 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 SECISBP2Q96T21 854 aaKnown RBP12.77□□□□□ -0.37
ACTN1-219ENST00000556432 EGFL8Q99944 293 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 DESI2Q9BSY9 194 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 PRDM14Q9GZV8 571 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 XAB2Q9HCS7 855 aaKnown RBP12.77□□□□□ -0.37
ACTN1-219ENST00000556432 JKAMPQ9P055 326 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 C6orf203Q9P0P8 240 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-219ENST00000556432 DAPP1Q9UN19 280 aa12.77□□□□□ -0.37
ACTN1-219ENST00000556432 NINQ8N4C6 2090 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 MBD3L4A6NDZ8 208 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-219ENST00000556432 MBD3L3A6NE82 208 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-219ENST00000556432 ANKDD1BA6NHY2 528 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 MBD3L5A6NJ08 208 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-219ENST00000556432 ACSL3O95573 720 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 ENO2P09104 434 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-219ENST00000556432 FPR1P21462 350 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 SERPINB3P29508 390 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 CPOXP36551 454 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 TGM3Q08188 693 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-219ENST00000556432 C9orf40Q8IXQ3 194 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 DND1Q8IYX4 353 aaKnown RBP12.76□□□□□ -0.37
ACTN1-219ENST00000556432 KRT78Q8N1N4 520 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 SLC15A4Q8N697 577 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 C9orf106Q8NAJ2 232 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 MBD3L2Q8NHZ7 208 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-219ENST00000556432 DIO2Q92813 273 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 SENP5Q96HI0 755 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-219ENST00000556432 DGAT2Q96PD7 388 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 PROK2Q9HC23 129 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 CHCHD2Q9Y6H1 151 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-219ENST00000556432 SPACA6W5XKT8 324 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 FREM3P0C091 2139 aa12.76□□□□□ -0.37
ACTN1-219ENST00000556432 WDR47O94967 919 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 CNOT4O95628 575 aaKnown RBP12.75□□□□□ -0.37
ACTN1-219ENST00000556432 C1QAP02745 245 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 C1GALT1C1LP0DN25 315 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 GNAZP19086 355 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 CDK9P50750 372 aaKnown RBP12.75□□□□□ -0.37
ACTN1-219ENST00000556432 PGGT1BP53609 377 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 ACKR1Q16570 336 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 VASNQ6EMK4 673 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 HMBOX1Q6NT76 420 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 SLC29A4Q7RTT9 530 aa12.75□□□□□ -0.37
ACTN1-219ENST00000556432 C2CD4AQ8NCU7 369 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-219ENST00000556432 PIK3IP1Q96FE7 263 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms