RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SH3BGRLO75368 114 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 STK16O75716 305 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 CCDC166P0CW27 439 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 CD99P14209 185 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 ZNF10P21506 573 aaPredicted RBP13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 HIST1H1TP22492 207 aaPredicted RBP13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 MAN2A2P49641 1150 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 PCDH1Q08174 1060 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 STX4Q12846 297 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 SERTAD2Q14140 314 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 SLC10A1Q14973 349 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 TBCCQ15814 346 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 RIPPLY2Q5TAB7 128 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 OPN5Q6U736 354 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 ARSKQ6UWY0 536 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 FRA10AC1Q70Z53 315 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 CREG2Q8IUH2 290 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 LAS2Q8IYD9 372 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 CLYBLQ8N0X4 340 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 LRRC25Q8N386 305 aaPredicted RBP13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 NUBPLQ8TB37 319 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 PPWD1Q96BP3 646 aaKnown RBP13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 NTNG2Q96CW9 530 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 KCNC2Q96PR1 638 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 GPATCH1Q9BRR8 931 aaKnown RBP13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 TBCDQ9BTW9 1192 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 EFCAB11Q9BUY7 163 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 CAPS2Q9BXY5 557 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 ZNF717Q9BY31 904 aaPredicted RBP13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 ST6GALNAC2Q9UJ37 374 aa13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.22□□□□□ -0.29
CHMP4BP1-201ENST00000556017 TRGV5A0A0B4J1U4 118 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 SYT5O00445 386 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 PROM1O43490 865 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 HCN1O60741 890 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 PRKRAO75569 313 aaKnown RBP13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 ZWINTO95229 277 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 STT3AP46977 705 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 ARL4CP56559 192 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 WNT3P56703 355 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 POU4F1Q01851 419 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 DLG1Q12959 904 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 PDIA2Q13087 525 aaKnown RBP13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 CHIT1Q13231 466 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 ZKSCAN8Q15776 578 aaPredicted RBP13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 PDK4Q16654 411 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 SLC25A35Q3KQZ1 300 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 PRAMEF20Q5VT98 475 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 SULT1C3Q6IMI6 304 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 GPSM1Q86YR5 675 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 ULK2Q8IYT8 1036 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 BBOF1Q8ND07 529 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 OR5L2Q8NGL0 311 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 NINJ1Q92982 152 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 SPACA9Q96E40 222 aaPredicted RBP13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 GPR22Q99680 433 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 SLC6A15Q9H2J7 730 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 COPS7BQ9H9Q2 264 aaPredicted RBP13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 ACKR4Q9NPB9 350 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 RASSF1Q9NS23 344 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 WWOXQ9NZC7 414 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 CRIM1Q9NZV1 1036 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 ACAD8Q9UKU7 415 aa13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 CNOT11Q9UKZ1 510 aaKnown RBP13.21□□□□□ -0.29
CHMP4BP1-201ENST00000556017 DNHD1Q96M86 4753 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SAP18O00422 153 aaKnown RBP13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CLGNO14967 610 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 LRATO95237 230 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TGFB1P01137 390 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 P04436 131 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FBXO45P0C2W1 286 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TNNI3P19429 210 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 KLK2P20151 261 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SSTR1P30872 391 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CEACAM8P31997 349 aaPredicted RBP13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 MSH2P43246 934 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 RPL21P46778 160 aaKnown RBP13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 HNRNPH2P55795 449 aaKnown RBP13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FOLH1Q04609 750 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FNDC7Q5VTL7 733 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SLC22A10Q63ZE4 541 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 C18orf63Q68DL7 685 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SYDE1Q6ZW31 735 aaPredicted RBP13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 KLHL7Q8IXQ5 586 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 TCAIMQ8N3R3 496 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FBXW8Q8N3Y1 598 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ZNF441Q8N8Z8 693 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SNX31Q8N9S9 440 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 OR7G3Q8NG95 312 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 OR10G3Q8NGC4 313 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 NEIL3Q8TAT5 605 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 UCN3Q969E3 161 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 SARAFQ96BY9 339 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 FBXL20Q96IG2 436 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 CD244Q9BZW8 370 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 OR51B5Q9H339 312 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 GSX1Q9H4S2 264 aaPredicted RBP13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 ZFP64Q9NPA5 681 aa13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 RPH3AQ9Y2J0 694 aaPredicted RBP13.2□□□□□ -0.3
CHMP4BP1-201ENST00000556017 PCDHGB3Q9Y5G1 929 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms