RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PPIBP23284 216 aaKnown RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 RORAP35398 523 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 FOLR3P41439 243 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 GCGRP47871 477 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 ANXA11P50995 505 aaKnown RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 NCBP2P52298 156 aaKnown RBP eCLIP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 MANFP55145 182 aaKnown RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 CLDN6P56747 220 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 RPS15P62841 145 aaKnown RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 PRR5P85299 388 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 MAT1AQ00266 395 aaKnown RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 FOXC1Q12948 553 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 RUNX2Q13950 521 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 UGT8Q16880 541 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 TRMT5Q32P41 509 aaKnown RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 VPS26BQ4G0F5 336 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 DNAL1Q4LDG9 190 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 C18orf63Q68DL7 685 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 REP15Q6BDI9 236 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 ANGPTL8Q6UXH0 198 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 QSOX2Q6ZRP7 698 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 ZNF771Q7L3S4 317 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 SZRD1Q7Z422 152 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 DHDDSQ86SQ9 333 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 RIMKLAQ8IXN7 391 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 NLGN4XQ8N0W4 816 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 POU5F2Q8N7G0 328 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 AMER3Q8N944 861 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 GALNT6Q8NCL4 622 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 NLGN4YQ8NFZ3 816 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 MOAP1Q96BY2 351 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 DGAT2Q96PD7 388 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 CSF3RQ99062 836 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 SH3GL1Q99961 368 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 NRSN2Q9GZP1 204 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 RAD21L1Q9H4I0 556 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 ACSS1Q9NUB1 689 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-220ENST00000555634 BTNL2Q9UIR0 455 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 PADI1Q9ULC6 663 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 PCDHGA7Q9Y5G6 932 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 AK5Q9Y6K8 562 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 SDK2Q58EX2 2172 aa10.55□□□□□ -0.72
SHMT2-220ENST00000555634 CEP250Q9BV73 2442 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 LOC100653049A0A140TA62 436 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 PRSS51A0A1B0GVH4 220 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 DCDC2BA2VCK2 349 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 GABRR3A8MPY1 467 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 C21orf140B9A014 251 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 AIM2O14862 343 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 BRINP1O60477 761 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 CTNSO60931 367 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 ERN1O75460 977 aaKnown RBP10.54□□□□□ -0.72
SHMT2-220ENST00000555634 KRT34O76011 436 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 CBX6O95503 412 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 IGHEP01854 428 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 IFNA16P05015 189 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 PORP16435 677 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-220ENST00000555634 CHI3L1P36222 383 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-220ENST00000555634 ETV5P41161 510 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 MC1RQ01726 317 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 FOLH1Q04609 750 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 HSPB3Q12988 150 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 NCF4Q15080 339 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 PRAMEF17Q5VTA0 474 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 MLIPQ5VWP3 458 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 OR4F3Q6IEY1 312 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 ANKRD26P1Q6NSI1 321 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 IGF2-ASQ6U949 168 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 OVCH1Q7RTY7 1134 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 IL22RA1Q8N6P7 574 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.54□□□□□ -0.72
SHMT2-220ENST00000555634 STT3BQ8TCJ2 826 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 MCUR1Q96AQ8 359 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 VPS33AQ96AX1 596 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 RCN3Q96D15 328 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 COQ8BQ96D53 544 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 RBM18Q96H35 190 aaKnown RBP10.54□□□□□ -0.72
SHMT2-220ENST00000555634 ART5Q96L15 291 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 ZNF578Q96N58 590 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-220ENST00000555634 PTCHD1Q96NR3 888 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 CRB3Q9BUF7 120 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 EFHD1Q9BUP0 239 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 TGIF2Q9GZN2 237 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 SLC26A1Q9H2B4 701 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 ACTL8Q9H568 366 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 C3orf14Q9HBI5 128 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 DLL3Q9NYJ7 618 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 TAS2R7Q9NYW3 318 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 KCMF1Q9P0J7 381 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 CTSFQ9UBX1 484 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 KCND3Q9UK17 655 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 MKL2Q9ULH7 1088 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 AP3M1Q9Y2T2 418 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 TMEM184BQ9Y519 407 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-220ENST00000555634 SNX8Q9Y5X2 465 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 DMDP11532 3685 aa10.54□□□□□ -0.72
SHMT2-220ENST00000555634 A0A096LPI6 279 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 ERICH4A6NGS2 130 aa10.53□□□□□ -0.72
SHMT2-220ENST00000555634 EVPLLA8MZ36 301 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms