RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 MRPS18BQ9Y676 258 aaKnown RBP10.28□□□□□ -0.76
SHMT2-218ENST00000555213 URB1O60287 2271 aaKnown RBP10.28□□□□□ -0.76
SHMT2-218ENST00000555213 ATRXP46100 2492 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 ASPDHA6ND91 283 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 IDSB3KWA1 339 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 C9JVG2 144 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 K7ENP7 123 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 GSC2O15499 205 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 CDC123O75794 336 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 DNAJC8O75937 253 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 MYO1DO94832 1006 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 BMP10O95393 424 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 IDO1P14902 403 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 ACPPP15309 386 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 CPN2P22792 545 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 MMP11P24347 488 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 BUD31P41223 144 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 MAPK12P53778 367 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 EMP2P54851 167 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 LIM2P55344 173 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 SNRPNP63162 240 aaKnown RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 PHC1P78364 1004 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 IRX1P78414 480 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 IL10RAQ13651 578 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 ERV3-1Q14264 604 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 TLR1Q15399 786 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 VWA2Q5GFL6 755 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 CCNYL2Q5T2Q4 361 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 NOXRED1Q6NXP6 359 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 INO80CQ6PI98 192 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 MRGPREQ86SM8 312 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 RETREG3Q86VR2 466 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 SNX32Q86XE0 403 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 RIMKLAQ8IXN7 391 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 MIER2Q8N344 545 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 METTL4Q8N3J2 472 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 C1orf52Q8N6N3 182 aaKnown RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 FAM47BQ8NA70 645 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 FNDC5Q8NAU1 212 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 RBM15BQ8NDT2 890 aaKnown RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 METTL2AQ96IZ6 378 aaKnown RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 EGLN2Q96KS0 407 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 BTBD10Q9BSF8 475 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 CADM1Q9BY67 442 aaKnown RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 LRMDAQ9H2I8 198 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 DDX31Q9H8H2 851 aaKnown RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 CPNE5Q9HCH3 593 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 TMEM45AQ9NWC5 275 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 CCDC167Q9P0B6 97 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 DAPP1Q9UN19 280 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 EXO1Q9UQ84 846 aaKnown RBP10.27□□□□□ -0.77
SHMT2-218ENST00000555213 MMACHCQ9Y4U1 282 aa10.27□□□□□ -0.77
SHMT2-218ENST00000555213 A0A0A6YYD5 115 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 GNG14A0A1W2PPG7 69 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 NKX2-8O15522 239 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 PCDH7O60245 1069 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 B4GALT2O60909 372 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 CNOT3O75175 753 aaKnown RBP10.26□□□□□ -0.77
SHMT2-218ENST00000555213 ALOX12BO75342 701 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 EEDO75530 441 aaKnown RBP10.26□□□□□ -0.77
SHMT2-218ENST00000555213 KLK1P06870 262 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 UMODP07911 640 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 SNRPB2P08579 225 aaKnown RBP10.26□□□□□ -0.77
SHMT2-218ENST00000555213 FAM58BPP0C7Q3 252 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 C8orf89P0DMQ9 161 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 NR2F6P10588 404 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 SDC1P18827 310 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 CAPN3P20807 821 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 PPP2R1BP30154 601 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 BSGP35613 385 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 GSTM5P46439 218 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 RRADP55042 308 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 CLDN8P56748 225 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 CORO7P57737 925 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 RPL38P63173 70 aaKnown RBP10.26□□□□□ -0.77
SHMT2-218ENST00000555213 KCNJ2P63252 427 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 TNFRSF17Q02223 184 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 SLC13A2Q13183 592 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 SLAMF1Q13291 335 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 RUNX2Q13950 521 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 CYLC2Q14093 348 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-218ENST00000555213 C8orf82Q6P1X6 216 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-218ENST00000555213 GALNT18Q6P9A2 607 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 ZNF793Q6ZN11 406 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 QSOX2Q6ZRP7 698 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 GPR180Q86V85 440 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 ZNF595Q8IYB9 648 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 LIX1Q8N485 282 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 KIF2BQ8N4N8 673 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 KRTCAP2Q8N6L1 136 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 C7orf57Q8NEG2 295 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 CMTM5Q96DZ9 223 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 FAIM2Q9BWQ8 316 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 SORBS1Q9BX66 1292 aaKnown RBP10.26□□□□□ -0.77
SHMT2-218ENST00000555213 VN1R1Q9GZP7 353 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 C1orf21Q9H246 121 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 PRDM9Q9NQV7 894 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 NOP53Q9NZM5 478 aaKnown RBP10.26□□□□□ -0.77
SHMT2-218ENST00000555213 ZIM2Q9NZV7 527 aa10.26□□□□□ -0.77
SHMT2-218ENST00000555213 MCM8Q9UJA3 840 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms