RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 WDR4P57081 412 aaKnown RBP11.53□□□□□ -0.56
SYNE2-214ENST00000554928 DUSP2Q05923 314 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 STX4Q12846 297 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 EXT1Q16394 746 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 PRSS53Q2L4Q9 553 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 UGT3A2Q3SY77 523 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 CRB2Q5IJ48 1285 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 KANK2Q63ZY3 851 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 H3F3CQ6NXT2 135 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 JMJD6Q6NYC1 403 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-214ENST00000554928 FAM180BQ6P0A1 224 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 IGFL3Q6UXB1 125 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 ANKRD42Q8N9B4 389 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 DNAJB14Q8TBM8 379 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 NCLNQ969V3 563 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 RNF166Q96A37 237 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-214ENST00000554928 TM4SF18Q96CE8 201 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 TLCD1Q96CP7 247 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 C11orf24Q96F05 449 aaPredicted RBP11.53□□□□□ -0.56
SYNE2-214ENST00000554928 CNDP1Q96KN2 507 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 C20orf27Q9GZN8 174 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 LIN28AQ9H9Z2 209 aaKnown RBP11.53□□□□□ -0.56
SYNE2-214ENST00000554928 KCNK9Q9NPC2 374 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 ADAP2Q9NPF8 381 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 HEY2Q9UBP5 337 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 VTI1BQ9UEU0 232 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 GIMAP2Q9UG22 337 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 ADAM29Q9UKF5 820 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 PCDHGB7Q9Y5F8 929 aa11.53□□□□□ -0.56
SYNE2-214ENST00000554928 TRBV11-1A0A0K0K1C0 115 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 SERTM1A2A2V5 107 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 DPM1O60762 260 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 CRCPO75575 148 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 DDAH2O95865 285 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 ALPPP05187 535 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 MYZAPP0CAP1 466 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 UROSP10746 265 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 BGNP21810 368 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 CASRP41180 1078 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 MAPK12P53778 367 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 MAGOHP61326 146 aaKnown RBP11.52□□□□□ -0.57
SYNE2-214ENST00000554928 TLE1Q04724 770 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 SRSF11Q05519 484 aaKnown RBP11.52□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF33BQ06732 778 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 RCN2Q14257 317 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 CHI3L2Q15782 390 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 IGFBP7Q16270 282 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 NDUFAF5Q5TEU4 345 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF468Q5VIY5 522 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-214ENST00000554928 IRAK1BP1Q5VVH5 260 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 Q6ZS92 163 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 Q6ZSR9 355 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 TRIM46Q7Z4K8 759 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 NUDCD3Q8IVD9 361 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 BEST3Q8N1M1 668 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 GBP7Q8N8V2 638 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-214ENST00000554928 B3GNT7Q8NFL0 401 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 MGARPQ8TDB4 240 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 THAP3Q8WTV1 239 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-214ENST00000554928 CDCP1Q9H5V8 836 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 ANKRD10Q9NXR5 420 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 AHSPQ9NZD4 102 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 ZDHHC2Q9UIJ5 367 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 ANAPC2Q9UJX6 822 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 CES1P1Q9UKY3 287 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 G3BP2Q9UN86 482 aaKnown RBP11.52□□□□□ -0.57
SYNE2-214ENST00000554928 PPIEQ9UNP9 301 aaKnown RBP11.52□□□□□ -0.57
SYNE2-214ENST00000554928 PCDHA9Q9Y5H5 950 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 HEMK1Q9Y5R4 338 aaPredicted RBP11.52□□□□□ -0.57
SYNE2-214ENST00000554928 DNAJC15Q9Y5T4 150 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 ACTL7BQ9Y614 415 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 SPACA6W5XKT8 324 aa11.52□□□□□ -0.57
SYNE2-214ENST00000554928 TMEM120BA0PK00 339 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 TMEM200CA6NKL6 621 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 C17orf105B2RV13 164 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 PCDH7O60245 1069 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 GPR75O95800 540 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 CLPSP04118 112 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 IL3P08700 152 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 CT62P0C5K7 136 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 LINC00032P0C843 101 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 ICAM2P13598 275 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 TIA1P31483 386 aaKnown RBP eCLIP11.51□□□□□ -0.57
SYNE2-214ENST00000554928 BUD31P41223 144 aaPredicted RBP11.51□□□□□ -0.57
SYNE2-214ENST00000554928 STT3AP46977 705 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 NAA20P61599 178 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 LSM11P83369 360 aaKnown RBP eCLIP11.51□□□□□ -0.57
SYNE2-214ENST00000554928 ELAVL1Q15717 326 aaKnown RBP11.51□□□□□ -0.57
SYNE2-214ENST00000554928 ACER2Q5QJU3 275 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 SH2D4BQ5SQS7 431 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 PAGE2Q7Z2X7 111 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 ZNF605Q86T29 641 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 ZADH2Q8N4Q0 377 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 SLC2A12Q8TD20 617 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 C16orf78Q8WTQ4 265 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 TANKQ92844 425 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 PNPLA2Q96AD5 504 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 C19orf60Q96EN9 201 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 LMF1Q96S06 567 aa11.51□□□□□ -0.57
SYNE2-214ENST00000554928 TRMOQ9BU70 441 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms