RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 PITHD1Q9GZP4 211 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 CNOT10Q9H9A5 744 aaKnown RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 ZFP64Q9NPA5 681 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 PGPEP1Q9NXJ5 209 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 TUBA8Q9NY65 449 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 ZNF223Q9UK11 482 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 CBLCQ9ULV8 474 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 EIF3LQ9Y262 564 aaKnown RBP7.53□□□□□ -1.2
ACTN1-212ENST00000554158 ATG4BQ9Y4P1 393 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 PCDHGB3Q9Y5G1 929 aa7.53□□□□□ -1.2
ACTN1-212ENST00000554158 GOLGA6L10A0A0M3HER8 536 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 LRIT2A6NDA9 550 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 RNF223E7ERA6 249 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 ERN1O75460 977 aaKnown RBP7.52□□□□□ -1.21
ACTN1-212ENST00000554158 CLEC3AO75596 197 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 TRAPPC6AO75865 159 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 S100BP04271 92 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-212ENST00000554158 CELA3AP09093 270 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 SMIM10L1P0DMW3 83 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 CCL3P10147 92 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 EPXP11678 715 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 SERPINB3P29508 390 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 CXCR5P32302 372 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 PIGAP37287 484 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 CPA2P48052 419 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 KCNC1P48547 511 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 MASP1P48740 699 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 TRPC1P48995 793 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 SLC12A2P55011 1212 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 LIM2P55344 173 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 DCAF7P61962 342 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 NKX6-1P78426 367 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-212ENST00000554158 TAGLNQ01995 201 aaKnown RBP7.52□□□□□ -1.21
ACTN1-212ENST00000554158 ASPHQ12797 758 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 RUNX2Q13950 521 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 RCAN2Q14206 197 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 SLBPQ14493 270 aaKnown RBP eCLIP7.52□□□□□ -1.21
ACTN1-212ENST00000554158 CRYMQ14894 314 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 MPEG1Q2M385 716 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 HYAL4Q2M3T9 481 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 PAGE2BQ5JRK9 111 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 PRAMEF20Q5VT98 475 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 TMEM198Q66K66 360 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 RTL6Q6ICC9 239 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 ADAMTSL2Q86TH1 951 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 SPNS2Q8IVW8 549 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 PPIL6Q8IXY8 311 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 ULK2Q8IYT8 1036 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 NKAPQ8N5F7 415 aaKnown RBP7.52□□□□□ -1.21
ACTN1-212ENST00000554158 SLC15A4Q8N697 577 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 SNX31Q8N9S9 440 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 SPC24Q8NBT2 197 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 TRIM58Q8NG06 486 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 NEIL3Q8TAT5 605 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 MS4A6EQ96DS6 147 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 RBM18Q96H35 190 aaKnown RBP7.52□□□□□ -1.21
ACTN1-212ENST00000554158 SMIM10Q96HG1 83 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 CAPZA3Q96KX2 299 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 ZNF597Q96LX8 424 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 KCNC2Q96PR1 638 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 GAL3ST4Q96RP7 486 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 CENPKQ9BS16 269 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 DOHHQ9BU89 302 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 SPNS1Q9H2V7 528 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 LZTFL1Q9NQ48 299 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 DLL4Q9NR61 685 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 BEX4Q9NWD9 120 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-212ENST00000554158 QPCTLQ9NXS2 382 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 CNIH4Q9P003 139 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 ZNF629Q9UEG4 869 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-212ENST00000554158 VTI1BQ9UEU0 232 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 DAPP1Q9UN19 280 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 CAMK2AQ9UQM7 478 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 RPH3AQ9Y2J0 694 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-212ENST00000554158 VWA7Q9Y334 891 aa7.52□□□□□ -1.21
ACTN1-212ENST00000554158 KIAA1549Q9HCM3 1950 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 IQANK1A0A1B0GTG1 560 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 MYOCOSA0A1B0GUC4 107 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 NPEPPSL1A6NEC2 478 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 CLCA1A8K7I4 914 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 TP53I11O14683 189 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 OR10H2O60403 315 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 LDB3O75112 727 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 ATE1O95260 518 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 EPPINO95925 133 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 AHSGP02765 367 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 HEXAP06865 529 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 CPN2P22792 545 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 CERS1P27544 350 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 TLX1P31314 330 aaPredicted RBP7.51□□□□□ -1.21
ACTN1-212ENST00000554158 HNRNPH1P31943 449 aaKnown RBP7.51□□□□□ -1.21
ACTN1-212ENST00000554158 OPRM1P35372 400 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 TIMP3P35625 211 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 NR0B1P51843 470 aaKnown RBP7.51□□□□□ -1.21
ACTN1-212ENST00000554158 RPP38P78345 283 aaKnown RBP7.51□□□□□ -1.21
ACTN1-212ENST00000554158 CDKL1Q00532 357 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 PLIN5Q00G26 463 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 BIKQ13323 160 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 LAPTM5Q13571 262 aa7.51□□□□□ -1.21
ACTN1-212ENST00000554158 DAZAP2Q15038 168 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms