RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 CHD9Q3L8U1 2897 aa11.69□□□□□ -0.54
SHMT2-207ENST00000553837 SLC5A10A0PJK1 596 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 SLC35F4A4IF30 521 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 FPGTO14772 594 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 OR2B3O76000 313 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 PDE9AO76083 593 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 AP2A2O94973 939 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 KCNK5O95279 499 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 SLC16A8O95907 504 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 C9P02748 559 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 EPCAMP16422 314 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 ENGP17813 658 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 IMPA1P29218 277 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 PBLDP30039 288 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-207ENST00000553837 MMP12P39900 470 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 RORCP51449 518 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 TEKQ02763 1124 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 ST3GAL4Q11206 333 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 CSTF3Q12996 717 aaKnown RBP11.68□□□□□ -0.54
SHMT2-207ENST00000553837 NFE2L1Q14494 772 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 DMC1Q14565 340 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 DUOXA1Q1HG43 343 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 LEXMQ3ZCV2 418 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 SLC35F1Q5T1Q4 408 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 LIPJQ5W064 366 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 GPR153Q6NV75 609 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 LIPIQ6XZB0 460 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 DPPA4Q7L190 304 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 PARS2Q7L3T8 475 aaKnown RBP11.68□□□□□ -0.54
SHMT2-207ENST00000553837 PTOV1Q86YD1 416 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 ZZZ3Q8IYH5 903 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 VN1R2Q8NFZ6 395 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 CDC26Q8NHZ8 85 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 LRRC20Q8TCA0 184 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 GPR151Q8TDV0 419 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 NELL1Q92832 810 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 GLYATL1Q969I3 302 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 WDFY2Q96P53 400 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 ZSCAN5AQ9BUG6 496 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 WRAP53Q9BUR4 548 aaKnown RBP11.68□□□□□ -0.54
SHMT2-207ENST00000553837 RSPH9Q9H1X1 276 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-207ENST00000553837 TMEM245Q9H330 911 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 UCKL1Q9NWZ5 548 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 GPR83Q9NYM4 423 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 MAT2BQ9NZL9 334 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 VPS29Q9UBQ0 182 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 IL36AQ9UHA7 158 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 SH2B3Q9UQQ2 575 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 HCN4Q9Y3Q4 1203 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 CARNS1A5YM72 827 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 MAGEB17A8MXT2 336 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 CLIC1O00299 241 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 KPNA5O15131 536 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 DIRAS1O95057 198 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 CISD3P0C7P0 127 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 CCNYL3P0C7X3 344 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 PSKH1P11801 424 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 ATF4P18848 351 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-207ENST00000553837 PRPS1L1P21108 318 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 CPN2P22792 545 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 MAPK1P28482 360 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 IRS1P35568 1242 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 RUNX1T1Q06455 604 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 TMEM115Q12893 351 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-207ENST00000553837 QPRTQ15274 297 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 TAB1Q15750 504 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 ZNF79Q15937 498 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 ZNF658BQ4V348 819 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-207ENST00000553837 ZNF805Q5CZA5 627 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 ZMAT1Q5H9K5 638 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 VTCN1Q7Z7D3 282 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 SAMD14Q8IZD0 417 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-207ENST00000553837 PGBD3Q8N328 593 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 TOE1Q96GM8 510 aaKnown RBP11.68□□□□□ -0.54
SHMT2-207ENST00000553837 PANX1Q96RD7 426 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 PCDHGB3Q9Y5G1 929 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 IRAK3Q9Y616 596 aa11.68□□□□□ -0.54
SHMT2-207ENST00000553837 PCM1Q15154 2024 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 K7ESM1 405 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 MEN1O00255 615 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 KIAA0355O15063 1070 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 DPM1O60762 260 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CPSF4O95639 269 aaKnown RBP11.67□□□□□ -0.54
SHMT2-207ENST00000553837 SOD1P00441 154 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 SEMG1P04279 462 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 NUDT7P0C024 238 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 ICAM2P13598 275 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 ACPPP15309 386 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CEBPBP17676 345 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 PXNP49023 591 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-207ENST00000553837 PRLHRP49683 370 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 BLVRAP53004 296 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 MAPK12P53778 367 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CRISP3P54108 245 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 CYP4F2P78329 520 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 S100A12P80511 92 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 TSTQ16762 297 aaKnown RBP11.67□□□□□ -0.54
SHMT2-207ENST00000553837 BTBD16Q32M84 506 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 SYTL3Q4VX76 610 aa11.67□□□□□ -0.54
SHMT2-207ENST00000553837 TMEM220Q6QAJ8 160 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms