RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 KRT83P78385 493 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 RBP5P82980 135 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 SCN1BQ07699 218 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 BFSP1Q12934 665 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 SCARB2Q14108 478 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 KNOP1Q1ED39 458 aaKnown RBP2.93□□□□□ -1.94
SCFD1-210ENST00000553693 TMEM44Q2T9K0 475 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 MUC21Q5SSG8 566 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 C11orf88Q6PI97 169 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 Q6ZVQ6 151 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 RAPH1Q70E73 1250 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 TRMT11Q7Z4G4 463 aaKnown RBP2.93□□□□□ -1.94
SCFD1-210ENST00000553693 ADCK2Q7Z695 626 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 NRARPQ7Z6K4 114 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 UNC45BQ8IWX7 931 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 CHCHD4Q8N4Q1 142 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 C11orf42Q8N5U0 333 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 KIAA1524Q8TCG1 905 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 DEPDC1BQ8WUY9 529 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 ITLN1Q8WWA0 313 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 PGAP3Q96FM1 320 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-210ENST00000553693 FZD8Q9H461 694 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 WDR41Q9HAD4 459 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 DEPPQ9NTK1 212 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 KIF1BO60333 1816 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 PEAK1Q9H792 1746 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 IFT172Q9UG01 1749 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 CRYBG1Q9Y4K1 1723 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 PPLO60437 1756 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 RALGAPA1Q6GYQ0 2036 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 DHX57Q6P158 1386 aaKnown RBP2.92□□□□□ -1.94
SCFD1-210ENST00000553693 BCLAF3A2AJT9 711 aaKnown RBP2.92□□□□□ -1.94
SCFD1-210ENST00000553693 A8MXE2 369 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 TMEM150CB9EJG8 249 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 KIF5CO60282 957 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 GLULP15104 373 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 RPL9P32969 192 aaKnown RBP2.92□□□□□ -1.94
SCFD1-210ENST00000553693 ATP6V1E1P36543 226 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 RGS7P49802 495 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 ZNF41P51814 821 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-210ENST00000553693 RFTN1Q14699 578 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-210ENST00000553693 POM121L1PQ3SYA9 428 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 KRBOX4Q5JUW0 171 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 UTF1Q5T230 341 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 LINC00242Q5T6M2 205 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 TCEAL6Q6IPX3 200 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 MOXD1Q6UVY6 613 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 C15orf52Q6ZUT6 534 aaKnown RBP2.92□□□□□ -1.94
SCFD1-210ENST00000553693 COX8CQ7Z4L0 72 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 GPR141Q7Z602 305 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 HIPK1Q86Z02 1210 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 HSCBQ8IWL3 235 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 NUP93Q8N1F7 819 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 PARP8Q8N3A8 854 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 KIF18AQ8NI77 898 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 NABP1Q96AH0 204 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 CCDC43Q96MW1 224 aaKnown RBP2.92□□□□□ -1.94
SCFD1-210ENST00000553693 SLC25A23Q9BV35 468 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 THUMPD3Q9BV44 507 aaKnown RBP2.92□□□□□ -1.94
SCFD1-210ENST00000553693 FNDC4Q9H6D8 234 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-210ENST00000553693 PHPT1Q9NRX4 125 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-210ENST00000553693 MTRRQ9UBK8 725 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 SATB2Q9UPW6 733 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 CCL27Q9Y4X3 112 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 OVOS2A0A0G2JMS6 1433 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 OVOS2A0A0J9YW53 1432 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 OVOS2Q6IE36 1432 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 ANKARQ7Z5J8 1434 aa2.92□□□□□ -1.94
SCFD1-210ENST00000553693 SBF2Q86WG5 1849 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 ATP7BP35670 1465 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 KNDC1Q76NI1 1749 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 TRAV18A0A075B6X5 111 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 A0A1W2PQ72 361 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 FAM168BA1KXE4 195 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 TRIM64A6NGJ6 449 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 TRIM64BA6NI03 449 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 A8MU76 341 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 E5RGE8 158 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 H0Y626 953 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 TBX10O75333 385 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 PENKP01210 267 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 MT-ND2P03891 347 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 PTMAP06454 111 aaKnown RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 ATP6V1B1P15313 513 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 GP5P40197 560 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 CAPZA1P52907 286 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 MFAP3P55082 362 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 NDPQ00604 133 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 MZT1Q08AG7 82 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 CAPRIN1Q14444 709 aaKnown RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 PPA1Q15181 289 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 CDC37Q16543 378 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 ECSCRQ19T08 205 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 CCDC92Q53HC0 331 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 LRRC73Q5JTD7 316 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 TMEM64Q6YI46 380 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 Q71RC1 249 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-210ENST00000553693 ARL10Q8N8L6 244 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 BANPQ8N9N5 519 aa2.91□□□□□ -1.94
SCFD1-210ENST00000553693 IQUBQ8NA54 791 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms