RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 RFC4P35249 363 aa5.09□□□□□ -1.59
PCNX1-205ENST00000553508 TNNT2P45379 298 aaPredicted RBP5.09□□□□□ -1.59
PCNX1-205ENST00000553508 RIDAP52758 137 aaKnown RBP5.09□□□□□ -1.59
PCNX1-205ENST00000553508 CAPZA1P52907 286 aa5.09□□□□□ -1.59
PCNX1-205ENST00000553508 KNOP1Q1ED39 458 aaKnown RBP5.09□□□□□ -1.59
PCNX1-205ENST00000553508 SHEQ5VZ18 495 aa5.09□□□□□ -1.59
PCNX1-205ENST00000553508 FAM91A1Q658Y4 838 aa5.09□□□□□ -1.59
PCNX1-205ENST00000553508 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
PCNX1-205ENST00000553508 ZNF530Q6P9A1 599 aaPredicted RBP5.09□□□□□ -1.59
PCNX1-205ENST00000553508 OR4Q3Q8NH05 313 aa5.09□□□□□ -1.59
PCNX1-205ENST00000553508 STRADBQ9C0K7 418 aa5.09□□□□□ -1.59
PCNX1-205ENST00000553508 MAP2P11137 1827 aaKnown RBP5.09□□□□□ -1.6
PCNX1-205ENST00000553508 KDRP35968 1356 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 ARHGEF37A1IGU5 675 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 RPL37AP8A6NKH3 93 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 HMGB1P1B2RPK0 211 aaPredicted RBP5.08□□□□□ -1.6
PCNX1-205ENST00000553508 LMO7DNF2Z398 122 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 FAM58BPP0C7Q3 252 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 LMO2P25791 158 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 ACY1Q03154 408 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 MAPK11Q15759 364 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 C9orf66Q5T8R8 295 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 AGAP7PQ5VUJ5 663 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 C15orf52Q6ZUT6 534 aaKnown RBP5.08□□□□□ -1.6
PCNX1-205ENST00000553508 RHOXF1Q8NHV9 184 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 BSCL2Q96G97 398 aaPredicted RBP5.08□□□□□ -1.6
PCNX1-205ENST00000553508 TSSK2Q96PF2 358 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 HNRNPABQ99729 332 aaKnown RBP5.08□□□□□ -1.6
PCNX1-205ENST00000553508 MOB1AQ9H8S9 216 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 WDR41Q9HAD4 459 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 ZNF107Q9UII5 783 aaPredicted RBP5.08□□□□□ -1.6
PCNX1-205ENST00000553508 KNSTRNQ9Y448 316 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 PCDHGA1Q9Y5H4 931 aa5.08□□□□□ -1.6
PCNX1-205ENST00000553508 PXDNLA1KZ92 1463 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 C4AP0C0L4 1744 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 A0A087WWV3 80 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 RPN1P04843 607 aaKnown RBP5.07□□□□□ -1.6
PCNX1-205ENST00000553508 DNAH10OSP0CZ25 163 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 ADRA2CP18825 462 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 EVCP57679 992 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 ZRANB3Q5FWF4 1079 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 LEMD1Q68G75 181 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 TXNRD3NBQ6F5E7 133 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 TCEAL6Q6IPX3 200 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 C17orf107Q6ZR85 190 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 SLFN11Q7Z7L1 901 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 RIT1Q92963 219 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 RAB3IPQ96QF0 476 aaPredicted RBP5.07□□□□□ -1.6
PCNX1-205ENST00000553508 INPP5KQ9BT40 448 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 LMAN1LQ9HAT1 526 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 MRGBPQ9NV56 204 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 TSPAN16Q9UKR8 245 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 CEP350Q5VT06 3117 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 KIF13BQ9NQT8 1826 aa5.07□□□□□ -1.6
PCNX1-205ENST00000553508 KIAA1217Q5T5P2 1943 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 A0A087WV48 116 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 ZNF732B4DXR9 585 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 K7EQG2 157 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 DKC1O60832 514 aaKnown RBP eCLIP5.06□□□□□ -1.6
PCNX1-205ENST00000553508 VIMP08670 466 aaKnown RBP5.06□□□□□ -1.6
PCNX1-205ENST00000553508 OR3A3P47888 321 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 GSK3BP49841 420 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 NAGLUP54802 743 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 ABRQ12979 859 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 PPA1Q15181 289 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 SLC27A4Q6P1M0 643 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 PHLDB2Q86SQ0 1253 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 RPAINQ86UA6 219 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 CARM1Q86X55 608 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 DZIP1Q86YF9 867 aaKnown RBP5.06□□□□□ -1.6
PCNX1-205ENST00000553508 C11orf52Q96A22 123 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 NABP1Q96AH0 204 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 TNFRSF13CQ96RJ3 184 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 BAG1Q99933 345 aaPredicted RBP5.06□□□□□ -1.6
PCNX1-205ENST00000553508 UBQLN3Q9H347 655 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 FNDC4Q9H6D8 234 aaPredicted RBP5.06□□□□□ -1.6
PCNX1-205ENST00000553508 PDRG1Q9NUG6 133 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 NOCTQ9UK39 431 aaKnown RBP5.06□□□□□ -1.6
PCNX1-205ENST00000553508 UTRNP46939 3433 aa5.06□□□□□ -1.6
PCNX1-205ENST00000553508 COL5A3P25940 1745 aaPredicted RBP5.06□□□□□ -1.6
PCNX1-205ENST00000553508 USP42Q9H9J4 1324 aaKnown RBP5.05□□□□□ -1.6
PCNX1-205ENST00000553508 A0A1B0GTH9 108 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 ZNF354AO60765 605 aaPredicted RBP5.05□□□□□ -1.6
PCNX1-205ENST00000553508 SH3BGRLO75368 114 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 PRDM1O75626 825 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 CALCAP01258 141 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 FCGR2BP31994 310 aaPredicted RBP5.05□□□□□ -1.6
PCNX1-205ENST00000553508 FCGR2CP31995 323 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 SLC1A3P43003 542 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 PRELPP51888 382 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 PEX3P56589 373 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 CNTN1Q12860 1018 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 KCTD2Q14681 263 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 TMEM44Q2T9K0 475 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 KLHL10Q6JEL2 608 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 TTC5Q8N0Z6 440 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 CSNK1G2-AS1Q8NCQ2 148 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 SMPDL3AQ92484 453 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 INTS14Q96SY0 518 aa5.05□□□□□ -1.6
PCNX1-205ENST00000553508 RBM24Q9BX46 236 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms